TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR160a-3p
Arabidopsis lyrata
GCGUAUGAGGAGCCAUGCAUA
aly-miR160a-5p
Arabidopsis lyrata
UGCCUGGCUCCCUGUAUGCCA
aly-miR160b-3p
Arabidopsis lyrata
GCGUACAGAGUAGUCAAGCAUG
aly-miR160b-5p
Arabidopsis lyrata
UGCCUGGCUCCCUGUAUGCCA
aly-miR160c-3p
Arabidopsis lyrata
GCGUACAAGGAGCCAAGCAUG
aly-miR160c-5p
Arabidopsis lyrata
UGCCUGGCUCCCUGUAUGCCA
ath-miR160a-3p
Arabidopsis thaliana
GCGUAUGAGGAGCCAUGCAUA
ath-miR160a-5p
Arabidopsis thaliana
UGCCUGGCUCCCUGUAUGCCA
ath-miR160b
Arabidopsis thaliana
UGCCUGGCUCCCUGUAUGCCA
ath-miR160c-3p
Arabidopsis thaliana
CGUACAAGGAGUCAAGCAUGA
ath-miR160c-5p
Arabidopsis thaliana
UGCCUGGCUCCCUGUAUGCCA
atr-miR160
Amborella trichopoda
UGCCUGGCUCCCUGUAUGCCA
bdi-miR160a-3p
Brachypodium distachyon
GCGUGCGAGGAGCCAAGCAUG
bdi-miR160a-5p
Brachypodium distachyon
UGCCUGGCUCCCUGUAUGCCA
bdi-miR160b-3p
Brachypodium distachyon
GCGUGCAAGGAGCCAAGCAUG
bdi-miR160b-5p
Brachypodium distachyon
UGCCUGGCUCCCUGUAUGCCA
bdi-miR160c-3p
Brachypodium distachyon
GCGUGCAAGGAGCCAAGCAUG
bdi-miR160c-5p
Brachypodium distachyon
UGCCUGGCUCCCUGUAUGCCA
bdi-miR160d-3p
Brachypodium distachyon
GCGUGCACGGAGCCAAGCAUA
bdi-miR160d-5p
Brachypodium distachyon
UGCCUGGCUCCCUGUAUGCCA
bdi-miR160e-3p
Brachypodium distachyon
GCAUUGAGGGAGUCAUGCAGG
bdi-miR160e-5p
Brachypodium distachyon
UGCCUGGCUCCCUGAAUGCCA
bdi-miR160f
Brachypodium distachyon
UGCCUGGCUCCCUGUAUGCC
bol-miR160a
Brassica oleracea
GCCUGGCUCCCUGUAUGCCAU
bol-miR160b
Brassica oleracea
UGCCUGGCUCCCUGUAUGCCA
bol-miR160c
Brassica oleracea
UGCCUGGCUCCCUGUAUGCCA
bra-miR160a
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160b
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160c
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160d
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160e
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160f
Brassica rapa
UGCCUGGCUCCCUGUAUGCCA
bra-miR160g
Brassica rapa
UGCCUGGCUCCCUGUAUACCA
cpa-miR160a
Carica papaya
UGCCUGGCUCCCUGUAUGCCA
cpa-miR160b
Carica papaya
UGCCUGGCUCCCUGUAUGCCA
cpa-miR160c-3p
Carica papaya
GCGUAUGAGGAGCCAUGCAUA
cpa-miR160c-5p
Carica papaya
UGCCUGGCUCCCUGUAUGCCA
cpa-miR160d
Carica papaya
UGCCUGGCUCCCUGAAUGCCA
cpa-miR160e
Carica papaya
UGCCUGGCUCCCUGUAUGCCA
cpa-miR160f-3p
Carica papaya
GCGUAUGAGGAGCCAUGCAUA
cpa-miR160f-5p
Carica papaya
UGCCUGGCUCCCUGUAUGCCA
cru-miR160a
Capsella rubella
UGCCUGGCUCCCUGUAUGCCA
cru-miR160b
Capsella rubella
UGCCUGGCUCCCUGUAUGCCA
cru-miR160c
Capsella rubella
UGCCUGGCUCCCUGUAUGCCA
csi-miR160a-3p
Citrus sinensis
GCGUAUGAGGAGCCAUGCAUA
csi-miR160a-5p
Citrus sinensis
GCCUGGCUCCCUGUAUGCCAU
csi-miR160b-3p
Citrus sinensis
GCGUACGAGGAGCCAAGCAUA
csi-miR160b-5p
Citrus sinensis
UGCCUGGCUCCCUGUAUGCCG
csi-miR160c-3p
Citrus sinensis
GCGUGCGAGGAGCCAUGCAUG
csi-miR160c-5p
Citrus sinensis
UGCCUGGCUCCCUGUAUGCUU
esa-miR160a
Eutrema salsugineum
UGCCUGGCUCCCUGUAUGCCA
esa-miR160b
Eutrema salsugineum
UGCCUGGCUCCCUGUAUGCCA
esa-miR160c
Eutrema salsugineum
UGCCUGGCUCCCUGUAUGCCA
fve-miR160a
Fragaria vesca
UGCCUGGCUCCCUGUAUGCCA
fve-miR160b
Fragaria vesca
UGCCUGGCUCCCUGUAUGCCA
gma-miR160a-3p
Glycine max
GCGUAUGAGGAGCCAAGCAUA
gma-miR160a-5p
Glycine max
UGCCUGGCUCCCUGUAUGCCA
gma-miR160b
Glycine max
UGCCUGGCUCCCUGUAUGCC
gma-miR160c
Glycine max
UGCCUGGCUCCCUGUAUGCC
gma-miR160d
Glycine max
UGCCUGGCUCCCUGUAUGCC
gma-miR160e
Glycine max
UGCCUGGCUCCCUGUAUGCC
gma-miR160f
Glycine max
UGCCUGGCUCCCUGUAUGCCA
lus-miR160a
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160b
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160c
Linum usitatissimum
UGCCUGGCUCCCUGGAUGCCA
lus-miR160d
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160e
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160f
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160g
Linum usitatissimum
UGCCUGGCUCCCUGGAUGCCA
lus-miR160h
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160i
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
lus-miR160j
Linum usitatissimum
UGCCUGGCUCCCUGUAUGCCA
mac-miR160a
Musa acuminata
UGCCUGGCUCCCUGCAUGCCA
mac-miR160b
Musa acuminata
UGCCUGGCUCCCUGUAUGCCA
mac-miR160c
Musa acuminata
UGCCUGGCUCCCUGUACGCCA
mac-miR160d
Musa acuminata
UGCCUGGCUCCCUGUAUGCCA
mac-miR160e
Musa acuminata
UGCCUGGCUCCCUGUAUGCCA
mac-miR160f
Musa acuminata
UGCCUGGCUCCCUGUAUGCCA
mac-miR160g
Musa acuminata
UGCCUGGCUCCCUGUAUGCCA
mdm-miR160a
Malus domestica
UGCCUGGCUCCCUGUAUGCCA
mdm-miR160b
Malus domestica
UGCCUGGCUCCCUGUAUGCCA
mdm-miR160c
Malus domestica
UGCCUGGCUCCCUGUAUGCCA
mdm-miR160d
Malus domestica
UGCCUGGCUCCCUGUAUGCCA
mdm-miR160e
Malus domestica
UGCCUGGCUCCCUGUAUGCCA
mes-miR160a
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCA
mes-miR160b
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCA
mes-miR160c
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCG
mes-miR160d
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCA
mes-miR160e
Manihot esculenta
UGCCUGGCUCCCUGAAUGCCAUC
mes-miR160f
Manihot esculenta
UGCCUGGCUCCCUGAAUGCCA
mes-miR160g
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCAUC
mes-miR160h
Manihot esculenta
UGCCUGGCUCCCUGUAUGCCAUU
mpo-miR160-b3.0r1-941
Marchantia polymorpha
UGCCUGGCUCCCUGUAUGCCA
mtr-miR160a
Medicago truncatula
UGCCUGGCUCCCUGUAUGCCA
mtr-miR160b
Medicago truncatula
UGCCUGGCUCCCUGUAUGCCA
mtr-miR160c
Medicago truncatula
UGCCUGGCUCCCUGAAUGCCA
mtr-miR160d
Medicago truncatula
UGCCUGGCUCCCUGUAUGCCA
mtr-miR160e
Medicago truncatula
UGCCUGGCUCCCUGUAUGCCA
mtr-miR160f
Medicago truncatula
GCGUGAAGGGAGUCAAGCAGG
osa-miR160a-3p
Oryza sativa
GCGUGCAAGGAGCCAAGCAUG
osa-miR160a-5p
Oryza sativa
UGCCUGGCUCCCUGUAUGCCA
osa-miR160b-3p
Oryza sativa
GCGUGCAAGGAGCCAAGCAUG
osa-miR160b-5p
Oryza sativa
UGCCUGGCUCCCUGUAUGCCA
osa-miR160c-3p
Oryza sativa
GCGUGCACGGAGCCAAGCAUA
osa-miR160c-5p
Oryza sativa
UGCCUGGCUCCCUGUAUGCCA
osa-miR160d-3p
Oryza sativa
GCGUGCGAGGAGCCAAGCAUG
osa-miR160d-5p
Oryza sativa
UGCCUGGCUCCCUGUAUGCCA
osa-miR160e-3p
Oryza sativa
GCGUGCGAGGUGCCAAGCAUG
osa-miR160e-5p
Oryza sativa
UGCCUGGCUCCCUGUAUGCCG
osa-miR160f-3p
Oryza sativa
GCAUUGAGGGAGUCAUGCAGG
osa-miR160f-5p
Oryza sativa
UGCCUGGCUCCCUGAAUGCCA
pha-miR160a
Panicum hallii
UGCCUGGCUCCCUGUAUGCCA
pha-miR160b
Panicum hallii
UGCCUGGCUCCCUGUAUGCCA
pha-miR160c
Panicum hallii
UGCCUGGCUCCCUGUAUGCCA
pha-miR160d
Panicum hallii
UGCCUGGCUCCCUGUAUGCCA
pha-miR160e
Panicum hallii
UGCCUGGCUCCCUGUAUGCCA
ppe-miR160a
Prunus persica
UGCCUGGCUCCCUGUAUGCCA
ppe-miR160b
Prunus persica
UGCCUGGCUCCCUGUAUGCCA
ppt-miR160a
Physcomitrella patens
UGCCUGGCUCCCUGUAUGCCA
ppt-miR160b
Physcomitrella patens
CGCCUGGCUCCCUGUAUGCCA
ppt-miR160c
Physcomitrella patens
CGCCUGGCUCCCUGCAUGCCA
ppt-miR160d
Physcomitrella patens
CGCCUGGCUCCCUGCAUGCCG
ppt-miR160e
Physcomitrella patens
UGCCUGGCUCCCUGUAUGCCA
ppt-miR160f
Physcomitrella patens
UGCCUGGCUCCCUGUAUGCCA
ppt-miR160g
Physcomitrella patens
UGCCUGGCUCCUUGUAUGCCA
ppt-miR160h
Physcomitrella patens
CGCCUGGCUCCUUGUAUGCCA
ppt-miR160i
Physcomitrella patens
CGCCUGGCUCCCUGUAUGCCA
ptc-miR160a
Populus trichocarpa
UGCCUGGCUCCCUGUAUGCCA
ptc-miR160b-3p
Populus trichocarpa
GCGUAUGAGGAGCCAUGCAUA
ptc-miR160b-5p
Populus trichocarpa
UGCCUGGCUCCCUGUAUGCCA
ptc-miR160c-3p
Populus trichocarpa
GCGUAUGAGGAGCCAUGCAUA
ptc-miR160c-5p
Populus trichocarpa
UGCCUGGCUCCCUGUAUGCCA
ptc-miR160d
Populus trichocarpa
UGCCUGGCUCCCUGUAUGCCA
ptc-miR160e-3p
Populus trichocarpa
GCAUGAGGGGAGUCGAGCAGG
ptc-miR160e-5p
Populus trichocarpa
UGCCUGGCUCCCUGAAUGCCA
ptc-miR160f
Populus trichocarpa
UGCCUGGCUCCCUGAAUGCCA
ptc-miR160g
Populus trichocarpa
UGCCUGGCUCCCUGGAUGCCA
ptc-miR160h
Populus trichocarpa
UGCCUGGCUCCCUGCAUGCCA
pvi-miR160a
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160b
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160c
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160d
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160e
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160f
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160g
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160h
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160i
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
pvi-miR160j
Panicum virgatum
UGCCUGGCUCCCUGUAUGCCA
rco-miR160a
Ricinus communis
UGCCUGGCUCCCUGUAUGCCA
rco-miR160b
Ricinus communis
UGCCUGGCUCCCUGUAUGCCA
rco-miR160c
Ricinus communis
UGCCUGGCUCCCUGAAUGCCA
sbi-miR160a
Sorghum bicolor
UGCCUGGCUCCCUGUAUGCCA
sbi-miR160b
Sorghum bicolor
UGCCUGGCUCCCUGUAUGCCA
sbi-miR160c
Sorghum bicolor
UGCCUGGCUCCCUGUAUGCCA
sbi-miR160d
Sorghum bicolor
UGCCUGGCUCCCUGUAUGCCA
sbi-miR160e
Sorghum bicolor
UGCCUGGCUCCCUGUAUGCCA
sbi-miR160f
Sorghum bicolor
UGCCUGGCUCCCUGAAUGCCA
sit-miR160a
Setaria italica
UGCCUGGCUCCCUGUAUGCCA
sit-miR160b
Setaria italica
UGCCUGGCUCCCUGUAUGCCA
sit-miR160c
Setaria italica
UGCCUGGCUCCCUGUAUGCCA
sit-miR160d
Setaria italica
UGCCUGGCUCCCUGUAUGCCA
sit-miR160e
Setaria italica
UGCCUGGCUCCCUGUAUGCCA
sly-miR160a
Solanum lycopersicum
UGCCUGGCUCCCUGUAUGCCA
smo-miR160a
Selaginella moellendorffii
UGCCUGGCUCCCUGUAUGCCA
smo-miR160b
Selaginella moellendorffii
UGCCUGGCUCCCUGUAUGCCA
spo-miR160a
Spirodela polyrhiza
UGCCUGGCUCCCUGUAUGCCA
spo-miR160b
Spirodela polyrhiza
UGCCUGGCUCCCUGUAUGCCA
stu-miR160a-3p
Solanum tuberosum
GCGUAUGAGGAGCCAAGCAUA
stu-miR160a-5p
Solanum tuberosum
UGCCUGGCUCCCUGUAUGCCA
stu-miR160b
Solanum tuberosum
UGCCUGGCUCCCUGUAUGCCA
tae-miR160
Triticum aestivum
UGCCUGGCUCCCUGUAUGCCA
tcc-miR160a
Theobroma cacao
UGCCUGGCUCCCUGAAUGCCA
tcc-miR160b
Theobroma cacao
UGCCUGGCUCCCUGUAUGCCA
tcc-miR160c
Theobroma cacao
UGCCUGGCUCCCUGGAUGCCA
vvi-miR160a
Vitis vinifera
UGCCUGGCUCCCUGAAUGCCAUC
vvi-miR160b
Vitis vinifera
UGCCUGGCUCCCUGAAUGCCAUC
vvi-miR160c
Vitis vinifera
UGCCUGGCUCCCUGUAUGCCA
vvi-miR160d
Vitis vinifera
UGCCUGGCUCCCUGUAUGCCA
vvi-miR160e
Vitis vinifera
UGCCUGGCUCCCUGUAUGCCA
zma-miR160a-3p
Zea mays
GCGUGCAAGGGGCCAAGCAUG
zma-miR160a-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zma-miR160b-3p
Zea mays
GCGUGCAAGGAGCCAAGCAUG
zma-miR160b-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zma-miR160c-3p
Zea mays
GCGUGCAUGGUGCCAAGCAUA
zma-miR160c-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zma-miR160d-3p
Zea mays
GCGUGCGUGGAGCCAAGCAUG
zma-miR160d-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zma-miR160e
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zma-miR160f-3p
Zea mays
GCGUGCGAGGUGCCAGGCAUG
zma-miR160f-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCG
zma-miR160g-3p
Zea mays
GCGUGCAAGGAGCCAAGCAUG
zma-miR160g-5p
Zea mays
UGCCUGGCUCCCUGUAUGCCA
zos-miR160a
Zostera marina
UGCCUGGCUCCCUGCAUGCCA
zos-miR160b
Zostera marina
UGCCUGGCUCCCUGUAUGCCA
zos-miR160c
Zostera marina
UGCCUGGCUCCCUGUAUGCCA