TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR827-3p
Arabidopsis lyrata
UUAGAUGACCAUCAACAAACG
aly-miR827-5p
Arabidopsis lyrata
UUUGUUGAUUGACAUCUAUAC
ath-miR827
Arabidopsis thaliana
UUAGAUGACCAUCAACAAACU
bdi-miR827-3p
Brachypodium distachyon
UUAGAUGACCAUCAGCAAACA
bdi-miR827-5p
Brachypodium distachyon
UUUUGUUGGUUGUCAUCUAACC
bra-miR827
Brassica rapa
UUAGAUGACCAUCAACAAAUA
cru-miR827
Capsella rubella
UUAGAUGACCAUCAACAAACG
csi-miR827
Citrus sinensis
UUAGAUGACCAUCAACAAACA
dca-miR827-b2.0r1-20623
Daucus carota
UUAGAUGAUCAUCAGCAAACA
esa-miR827
Eutrema salsugineum
UUAGAUGACCAUCAACAAACG
fve-miR827
Fragaria vesca
UUAGAUGACCAUCAACAAACA
mac-miR827
Musa acuminata
UUAGAUGACCAUCAGCAAACA
mdm-miR827
Malus domestica
UUAGAUGACCAUCAACGAACA
mes-miR827
Manihot esculenta
UUAGAUGACCAUCAACAAACA
osa-miR827
Oryza sativa
UUAGAUGACCAUCAGCAAACA
pha-miR827
Panicum hallii
UUUUGUUGGUUGUCAUCUAACC
ppe-miR827
Prunus persica
UUAGAUGACCAUCAACAAACA
ptc-miR827
Populus trichocarpa
UUAGAUGACCAUCAACGAAAA
pvi-miR827
Panicum virgatum
UUAGAUGACCAUCAGCAAACA
sly-miR827
Solanum lycopersicum
UUAGAUGAACAUCAACAAACA
stu-miR827-3p
Solanum tuberosum
UUAGAUGAACAUCAACAAACA
stu-miR827-5p
Solanum tuberosum
UUUGUUGAUGGUCAUCUAUUC
tcc-miR827
Theobroma cacao
UUAGAUGACCAUCAACAAACA
zma-miR827-3p
Zea mays
UUAGAUGACCAUCAGCAAACA
zma-miR827-5p
Zea mays
UUUGUUGGUGGUCAUUUAACC