TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
csi-miR482a-3p
Citrus sinensis
UCUUCCCUAUGCCUCCCAUUCC
csi-miR482b-3p
Citrus sinensis
UCUUGCCCACCCCUCCCAUUCC
csi-miR482g-3p
Citrus sinensis
UCUUCCCUAUGCCUCCCAUUCC
fve-miR482a
Fragaria vesca
UCUUUCCAAUUCCUCCCAUGCC
fve-miR482b
Fragaria vesca
UCUUUCCUAGUCCUGCCAUUCC
fve-miR482c
Fragaria vesca
UCUUUCCUAUUCCUCCCAUCCC
gma-miR2118a-5p
Glycine max
GGAGAUGGGAGGGUCGGUAAAG
gma-miR2118b-5p
Glycine max
GGAGAUGGGAGGGUCGGUAAAG
gma-miR482a-3p
Glycine max
UCUUCCCAAUUCCGCCCAUUCCUA
gma-miR482b-3p
Glycine max
UCUUCCCUACACCUCCCAUACC
gma-miR482c-3p
Glycine max
UUCCCAAUUCCGCCCAUUCCU
gma-miR482d-3p
Glycine max
UCUUCCCUACACCUCCCAUACC
gra-miR482
Gossypium raimondii
UCUUUCCAAUUCCUCCCAUUCC
gra-miR482c
Gossypium raimondii
UUCCCAAAACCUCCAAUUCCAA
mac-miR482a
Musa acuminata
UUUCCAAUGCCUCCCAUGCCAA
mac-miR482b
Musa acuminata
UUUCCAAUACCUCCCAUGCCAA
mdm-miR482a-3p
Malus domestica
UUCCCAAGCCCGCCCAUUCCUA
mdm-miR482a-5p
Malus domestica
AGGAAUGGGCUGUUUGGGAAGA
mdm-miR482b
Malus domestica
UCUUUCCUAUCCCUCCCAUUCC
mdm-miR482c
Malus domestica
UCUUUCCUAACCCUCCCAUUCC
mdm-miR482d
Malus domestica
AAUGGAAGGGUAGGAAAGAAG
mes-miR482b
Manihot esculenta
UUCCCAAUGUCGCCCAUUCCGA
mes-miR482e
Manihot esculenta
UCUUACCUACACCGCCCAUGCC
mtr-miR2118
Medicago truncatula
UUACCGAUUCCACCCAUUCCUA
mtr-miR482-3p
Medicago truncatula
CUUACCUACACCUCCCAUGCC
mtr-miR482-5p
Medicago truncatula
GGCAUGGGAUAGUAGGGAAGA
osa-miR2118e
Oryza sativa
UUCCCAAUGCCUCCCAUGCCUA
osa-miR2118g
Oryza sativa
UUCCUAAUGCCUCCCAUUCCUA
osa-miR2118r
Oryza sativa
UUCCCAAUGCCUCCCAUGCCUA
ppe-miR482a-3p
Prunus persica
UUUCCGAAACCUCCCAUUCCAA
ppe-miR482b-3p
Prunus persica
CUUCCCAAACCUCCCAUUCCUA
ppe-miR482b-5p
Prunus persica
GGAAUGGGAGGAUUGGGAAAA
ppe-miR482c-3p
Prunus persica
UUCCCAAGCCCGCCCAUUCCAA
ppe-miR482c-5p
Prunus persica
GGAAUGGGCUGUUUGGGAUG
ppe-miR482e
Prunus persica
UUGCCUAUUCCUCCCAUGCCAA
ppe-miR482f
Prunus persica
UCUUUCCUACUCCACCCAUUCC
ptc-miR1448
Populus trichocarpa
CUUUCCAACGCCUCCCAUAC
ptc-miR482a.1
Populus trichocarpa
CCUACUCCUCCCAUUCC
ptc-miR482a.2
Populus trichocarpa
UCUUGCCUACUCCUCCCAUU
ptc-miR482b-3p
Populus trichocarpa
UUACCAAUACCUCUCAUGCCAA
ptc-miR482c-3p
Populus trichocarpa
UCUUUCCGAGUCCUCCCAUACC
pvu-miR482-3p
Phaseolus vulgaris
UCUUCCCAAUUCCGCCCAUUCC
pvu-miR482-5p
Phaseolus vulgaris
GGAAUGGGCUGAUUGGGAAGCA
sly-miR482a
Solanum lycopersicum
UUUCCAAUUCCACCCAUUCCUA
sly-miR482b
Solanum lycopersicum
UCUUGCCUACACCGCCCAUGCC
sly-miR482c
Solanum lycopersicum
UCUUGCCAAUACCGCCCAUUCC
sly-miR482d-3p
Solanum lycopersicum
UUUCCUAUUCCACCCAUGCCAA
sly-miR482d-5p
Solanum lycopersicum
GGAGUGGGUGGGAUGGAAAAA
sly-miR482e-3p
Solanum lycopersicum
UCUUUCCUACUCCUCCCAUACC
sly-miR482e-5p
Solanum lycopersicum
UGUGGGUGGGGUGGAAAGAUU
stu-miR482a-3p
Solanum tuberosum
UUUCCAAUUCCACCCAUUCCUA
stu-miR482b-5p
Solanum tuberosum
GGAGUGGGUGGCAUGGUAAGA
stu-miR482c
Solanum tuberosum
UUUCCUAUUCCACCCAUGCCAA
stu-miR482d-3p
Solanum tuberosum
UCUUGCCUACACCGCCCAUGCC
stu-miR482e-3p
Solanum tuberosum
UCUUGCCAAUACCGCCCAUUCC
stu-miR482e-5p
Solanum tuberosum
AGUGGGUGGUGUGGUAAGAUU
vvi-miR482
Vitis vinifera
UCUUUCCUACUCCUCCCAUUCC
zma-miR2118f
Zea mays
UUCCCAAUGCCUUCCAUGCCUA