TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

Gossypium raimondii



The first genome-sequenced cotton species is Gossypium raimonddi. G. raimonddi contributes the D genome to the allotetraploid cotton G. hirsutum (AD genome) that is the source of the majority of cotton production. G. raimonddi genome assembly represents ~750 megabases distributed on 13 pseudomolecules and 22 large scaffolds (phytozome). A recent cotton genome assembly produces ~775 MB sequences with ~570 MB incorporated into 13 pseudomolecules (Wang et al. Nature Genetics,2012). RNA-seq data support 40,976 annotated genes.



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