TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR162a-3p
Arabidopsis lyrata
UCGAUAAACCUCUGCAUCCAG
aly-miR162a-5p
Arabidopsis lyrata
GGAGGCAGCGGUUCAUCGAUC
aly-miR162b-3p
Arabidopsis lyrata
UCGAUAAACCUCUGCAUCCAG
aly-miR162b-5p
Arabidopsis lyrata
GGAGGCAGCGGUUCAUCGAUC
ath-miR162a-3p
Arabidopsis thaliana
UCGAUAAACCUCUGCAUCCAG
ath-miR162a-5p
Arabidopsis thaliana
UGGAGGCAGCGGUUCAUCGAUC
ath-miR162b-3p
Arabidopsis thaliana
UCGAUAAACCUCUGCAUCCAG
ath-miR162b-5p
Arabidopsis thaliana
UGGAGGCAGCGGUUCAUCGAUC
bdi-miR162
Brachypodium distachyon
UCGAUAAACCUCUGCAUCCGG
bol-miR162
Brassica oleracea
UCGAUAAACCUCUGCAUCCA
bra-miR162a
Brassica rapa
UCGAUAAACCUCUGCAUCCAG
bra-miR162b
Brassica rapa
UCGAUAAACCUGUGCAUCCAG
bra-miR162c
Brassica rapa
UCGAUAAACCUCUGCAUCCAG
cpa-miR162a
Carica papaya
UCGAUAAACCUCUGCAUCCAG
csi-miR162-3p
Citrus sinensis
UCGAUAAACCUCUGCAUCCAG
csi-miR162-5p
Citrus sinensis
UGGAGGCAGCGGUUCAUCGAUC
esa-miR162a
Eutrema salsugineum
UCGAUAAACCUCUGCAUCCAG
esa-miR162b
Eutrema salsugineum
UCGAUAAACCUCUGCAUCCAG
fve-miR162-3p
Fragaria vesca
UCGAUAAACCUCUGCAUCCAG
fve-miR162-5p
Fragaria vesca
GGAGGCAGCGGUUCAUCGAUC
gma-miR162a
Glycine max
UCGAUAAACCUCUGCAUCCA
gma-miR162b
Glycine max
UCGAUAAACCUCUGCAUCCAG
gma-miR162c
Glycine max
UCGAUAAACCUCUGCAUCCAG
lus-miR162a
Linum usitatissimum
UCGAUAAACCUCUGCAUCCAG
lus-miR162b
Linum usitatissimum
UCGAUAAACCUCUGCAUCCAG
mac-miR162a
Musa acuminata
UCGAUAAACCUCUGCAUCCAG
mac-miR162b
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mac-miR162c
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mac-miR162d
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mac-miR162e
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mac-miR162f
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mac-miR162g
Musa acuminata
UCGAUAAACCUCUGCAUCCGG
mdm-miR162a
Malus domestica
UCGAUAAACCUCUGCAUCCAG
mdm-miR162b
Malus domestica
UCGAUAAACCUCUGCAUCCAG
mes-miR162
Manihot esculenta
UCGAUAAACCUCUGCAUCCAG
mtr-miR162
Medicago truncatula
UCGAUAAACCUCUGCAUCCAG
osa-miR162a
Oryza sativa
UCGAUAAACCUCUGCAUCCAG
osa-miR162b
Oryza sativa
UCGAUAAGCCUCUGCAUCCAG
pha-miR162
Panicum hallii
UCGAUAAACCUCUGCAUCCAG
ppe-miR162
Prunus persica
UCGAUAAACCUCUGCAUCCAG
ptc-miR162a
Populus trichocarpa
UCGAUAAACCUCUGCAUCCAG
ptc-miR162b
Populus trichocarpa
UCGAUAAACCUCUGCAUCCAG
pvi-miR162a
Panicum virgatum
UCGAUAAACCUCUGCAUCCAG
pvi-miR162b
Panicum virgatum
UCGAUAAACCUCUGCAUCCAG
rco-miR162
Ricinus communis
UCGAUAAACCUCUGCAUCCAG
sbi-miR162
Sorghum bicolor
UCGAUAAACCUCUGCAUCCAG
sit-miR162
Setaria italica
UCGAUAAACCUCUGCAUCCAG
sly-miR162
Solanum lycopersicum
UCGAUAAACCUCUGCAUCCAG
stu-miR162a-3p
Solanum tuberosum
UCGAUAAACCUCUGCAUCCAG
stu-miR162a-5p
Solanum tuberosum
GGAGGCAGCGGUUCAUCGAUC
stu-miR162b-3p
Solanum tuberosum
UCGAUAAACCUCUGCAUCCAG
stu-miR162b-5p
Solanum tuberosum
GGAGGCAGCGGUUCAUCGAUC
tcc-miR162
Theobroma cacao
UCGAUAAACCUCUGCAUCCAG
vvi-miR162
Vitis vinifera
UCGAUAAACCUCUGCAUCCAG
zma-miR162-3p
Zea mays
UCGAUAAACCUCUGCAUCCA