TarDB

Precursor miRNA Sequence(5'-3')

GGUUCAUGUUUUCUCUGGAAGAGAGCUCUCUUCAGUCCACUCUGAAAUGGCUGUAGGGUUUCAUUAGCUGCCGACUCAUCCAUUCACCUGCCAAGAACCAUGGACAGGUCUGGUCUUGGUAGCCGAGUGGGUGGCGCGGGAGCUAAAAUCAAGCUCUACGCUGUUUGUGGUUGGACUGAAGGGUGCUCCCUUUUGUUUGCUCAAACGCU

miRBase

Precursor miRNA Structure(5'-3')

GGUUCAUGUUUUCUCU     A    U            C  UG       U         --CA      G   AC          AC         A   U  A 
                GGAAG GAGC CUCUUCAGUCCA UC  AAAUGGC GUAGGGUUU    UUAGCU CCG  UCAUCCAUUC  CUGCCAAGA CCA GG C
                ||||| |||| |||||||||||| ||  ||||||| |||||||||    |||||| |||  ||||||||||  ||||||||| ||| || A
                UUUUC CUCG GGGAAGUCAGGU GG  UUUGUCG CAUCUCGAA    AAUCGA GGC  GGUGGGUGAG  GAUGGUUCU GGU CU U
-UCGCAAACUCGUUUG     C    U            U  UG       -         CUAA      G   GC          CC         -   -  G

mdm-miR319b-5p -GAGCUUU-CUUCAGUCCACUC- mtr-miR319b-5p -GAGCUUU-CUUUAGUCCACUCA mdm-miR319e -GAGCUUU-CUUCAGUCCACUC- mdm-miR319c-5p -GAGCUCUUCUUCAGUCCAGUCC mdm-miR319h -GAGCUCUUCUUCAGUCCAGUCC bdi-miR319b-5p AGAGCUCU-CUUCAGUCCACUC- mtr-miR319d-5p AGAGCUCU-CUUCAGUCCACUC- zma-miR319a-5p -GAGCUCU-CUUCAGUCCACUC- zma-miR319c-5p -GAGCUCU-CUUCAGUCCACUC- mdm-miR319g -GAGCUUU-CUUCAGUCCACUC- mdm-miR319f -GAGCUUU-CUUCAGUCCACUC- mtr-miR319a-5p AGAGCUUC-CUUCAGUCCACUC- aly-miR319b-5p AGAGCUUU-CUUCGGUCCACUC- ppt-miR319d-5p.1 -GAGCUUU-CUUCGGUCCAAUA- ***** *** ***** *

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.