TarDB

Precursor miRNA Sequence(5'-3')

CAGCGUGGAGCUUUCUUCGGUCCAAUAGUGGCUGAGUCGAAGGUUGUGCUGCUGCCGACUCAAACUUCCGGCUUCCCUAUCCAACCCCUGGUAUGGAAUCCGAAUGUCUGAUACGGGAGCUGUUCAAUCUCCGGCUUAGCAUCUCUUGGACUGAAGGGAGCUCCCCGCUG

miRBase

Precursor miRNA Structure(5'-3')

     U                   U  UG         A      U  U   G   AC   A  UUC   C    C  U   A 
CAGCG GGAGCUUUCUUCGGUCCAA AG  GCUGAGUCG AGGUUG GC GCU CCG  UCA AC   CGG UUCC UA CCA C
||||| ||||||||||||||||||| ||  ||||||||| |||||| || ||| |||  ||| ||   ||| |||| || ||| C
GUCGC CCUCGAGGGAAGUCAGGUU UC  CGAUUCGGC UCUAAC UG CGA GGC  AGU UG   GCC AAGG AU GGU U
     C                   C  UA         C      U  U   G   AU   C  UAA   U    U  -   C

mdm-miR319b-5p -GAGCUUU-CUUCAGUCCACUC- mtr-miR319b-5p -GAGCUUU-CUUUAGUCCACUCA mdm-miR319e -GAGCUUU-CUUCAGUCCACUC- mdm-miR319c-5p -GAGCUCUUCUUCAGUCCAGUCC mdm-miR319h -GAGCUCUUCUUCAGUCCAGUCC bdi-miR319b-5p AGAGCUCU-CUUCAGUCCACUC- mtr-miR319d-5p AGAGCUCU-CUUCAGUCCACUC- zma-miR319a-5p -GAGCUCU-CUUCAGUCCACUC- zma-miR319c-5p -GAGCUCU-CUUCAGUCCACUC- mdm-miR319g -GAGCUUU-CUUCAGUCCACUC- mdm-miR319f -GAGCUUU-CUUCAGUCCACUC- mtr-miR319a-5p AGAGCUUC-CUUCAGUCCACUC- aly-miR319b-5p AGAGCUUU-CUUCGGUCCACUC- ppt-miR319d-5p.1 -GAGCUUU-CUUCGGUCCAAUA- ***** *** ***** *

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.