TarDB

Precursor miRNA Sequence(5'-3')

AUAUAUGAAAGGAGCUCUUCUUCAGUCCAGUCCUUGGCAGUUUAAGGGCUGGCACUCAGCUGCUGACUCGUUGGUUCAAAAACUCAUCAUACAUUUGCUAAAAGAAGUGGUGUUUUUCUGAUCCAACGAAGCAGGAGCCGAGAGGUUGGUUAUUGCUGUCACGUCUUGGACUGAAGGGAGCUCCUUACCUAUA

miRBase

Precursor miRNA Structure(5'-3')

A    U A          U           UC U       UUAAG       -A   A   G   AC       U   A   CU      ACA   G 
 UAUA G AAGGAGCUCU CUUCAGUCCAG  C UGGCAGU     GGCUGGC  CUC GCU CUG  UCGUUGG UCA AAA  CAUCAU   UUU C
 |||| | |||||||||| |||||||||||  | |||||||     |||||||  ||| ||| |||  ||||||| ||| |||  ||||||   |||  
 AUAU C UUCCUCGAGG GAAGUCAGGUU  G ACUGUCG     UUGGUUG  GAG CGA GAC  AGCAACC AGU UUU  GUGGUG   AAA A
-    C A          -           CU C       --UUA       GA   C   G   GA       U   C   UU      AAG   A

mdm-miR319b-5p -GAGCUUU-CUUCAGUCCACUC- mtr-miR319b-5p -GAGCUUU-CUUUAGUCCACUCA mdm-miR319e -GAGCUUU-CUUCAGUCCACUC- mdm-miR319c-5p -GAGCUCUUCUUCAGUCCAGUCC mdm-miR319h -GAGCUCUUCUUCAGUCCAGUCC bdi-miR319b-5p AGAGCUCU-CUUCAGUCCACUC- mtr-miR319d-5p AGAGCUCU-CUUCAGUCCACUC- zma-miR319a-5p -GAGCUCU-CUUCAGUCCACUC- zma-miR319c-5p -GAGCUCU-CUUCAGUCCACUC- mdm-miR319g -GAGCUUU-CUUCAGUCCACUC- mdm-miR319f -GAGCUUU-CUUCAGUCCACUC- mtr-miR319a-5p AGAGCUUC-CUUCAGUCCACUC- aly-miR319b-5p AGAGCUUU-CUUCGGUCCACUC- ppt-miR319d-5p.1 -GAGCUUU-CUUCGGUCCAAUA- ***** *** ***** *

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.