TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR168a-3p
Arabidopsis lyrata
CCCGCCUUGCAUCAACUGAAU
aly-miR168a-5p
Arabidopsis lyrata
UCGCUUGGUGCAGGUCGGGAA
aly-miR168b-3p
Arabidopsis lyrata
CCCGUCUUGUAUCAACUGAAU
aly-miR168b-5p
Arabidopsis lyrata
UCGCUUGGUGCAGGUCGGGAA
ath-miR168a-3p
Arabidopsis thaliana
CCCGCCUUGCAUCAACUGAAU
ath-miR168a-5p
Arabidopsis thaliana
UCGCUUGGUGCAGGUCGGGAA
ath-miR168b-3p
Arabidopsis thaliana
CCCGUCUUGUAUCAACUGAAU
ath-miR168b-5p
Arabidopsis thaliana
UCGCUUGGUGCAGGUCGGGAA
atr-miR168
Amborella trichopoda
UCGCUUGGUGCAGGUCGGGAA
bdi-miR168-3p
Brachypodium distachyon
CCCGCCUUGCACCAAGUGAAU
bdi-miR168-5p
Brachypodium distachyon
UCGCUUGGUGCAGAUCGGGAC
bol-miR168a
Brassica oleracea
UCGCUUGGUGCAGGUCGGGA
bol-miR168b
Brassica oleracea
UCGCUUGGUGCAGGUCGGGACU
bol-miR168c
Brassica oleracea
UCGCUUGGUGCAGGUCGGGA
bra-miR168a
Brassica rapa
UCGCUUGGUGCAGGUCGGGAAC
bra-miR168b
Brassica rapa
UCGCUUGGUGCAGGUCGGGAC
bra-miR168c
Brassica rapa
UCGCUUGGUGCAGGUCGGGAC
bra-miR168d
Brassica rapa
UCGCUUGGUGCAGGUCGGGAAC
bra-miR168e
Brassica rapa
UCGCUUGGUGCAGGUCGGGAAC
bra-miR168f
Brassica rapa
UCGCUUGGUGCAGGUCGGGAAC
ccl-miR168
Citrus clementina
UCGCUUGGUGCAGGUCGGGAA
cru-miR168a
Capsella rubella
UCGCUUGGUGCAGGUCGGGAA
cru-miR168b
Capsella rubella
UCGCUUGGUGCAGGUCGGGAA
csi-miR168-3p
Citrus sinensis
CCCGCCUUGCAUCAACUGAAU
csi-miR168-5p
Citrus sinensis
UCGCUUGGUGCAGGUCGGGAA
dca-miR168-b2.0r1-26801
Daucus carota
UCGCUUGGUGCAGGUCGGGACC
dca-miR168-b2.0r1-3777
Daucus carota
UCGCUUGGUGCAGGUCGGGACC
dca-miR168-b2.0r1-553
Daucus carota
UCGCUUGGUGCAGGUCGGGACC
esa-miR168a
Eutrema salsugineum
UCGCUUGGUGCAGGUCGGGAA
esa-miR168b
Eutrema salsugineum
UCGCUUGGUGCAGGUCGGGAA
esa-miR168c
Eutrema salsugineum
UCGCUUGGUGCAGGUCGGGAA
esa-miR168d
Eutrema salsugineum
UCGCUUGAUGCAGGUCGGGAAU
esa-miRN1029
Eutrema salsugineum
UCCCGACUGCAUCAACUGAAU
fve-miR168-3p
Fragaria vesca
CCCGCCUUGCAUCAACUGAAU
fve-miR168-5p
Fragaria vesca
UCGCUUGGUGCAGGUCGGGAA
gma-miR168a
Glycine max
UCGCUUGGUGCAGGUCGGGAA
gma-miR168b
Glycine max
UCGCUUGGUGCAGGUCGGG
hvu-miR168-3p
Hordeum vulgare
GAUCCCGCCUUGCACCAAGUGAAU
hvu-miR168-5p
Hordeum vulgare
UCGCUUGGUGCAGAUCGGGAC
lus-miR168a
Linum usitatissimum
UCGCUUGGUGCAGGUCGGGAA
lus-miR168b
Linum usitatissimum
UCGCUUGGUGCAGGUCGGGAA
mac-miR168a
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168b
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168c
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168d
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168e
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168f
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168g
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168h
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168i
Musa acuminata
UCGCUUGGUGCAGGUCGGGAA
mac-miR168j
Musa acuminata
UCGCUUGGUGCAGGUCGGGGC
mdm-miR168a
Malus domestica
UCGCUUGGUGCAGGUCGGGAA
mdm-miR168b
Malus domestica
UCGCUUGGUGCAGGUCGGGAA
mes-miR168a
Manihot esculenta
UCGCUUGGUGCAGGUCGGGAA
mtr-miR168a
Medicago truncatula
UUGCUUGGUGCUGGUCGGGAA
mtr-miR168b
Medicago truncatula
UCGCUUGGUGCAGGUCGGGAA
mtr-miR168c-3p
Medicago truncatula
CCCGCCUUGCAUCAACUGAAU
mtr-miR168c-5p
Medicago truncatula
UCGCUUGGUGCAGGUCGGGAA
osa-miR168a-3p
Oryza sativa
GAUCCCGCCUUGCACCAAGUGAAU
osa-miR168a-5p
Oryza sativa
UCGCUUGGUGCAGAUCGGGAC
pha-miR168
Panicum hallii
UCGCUUGGUGCAGAUCGGGAC
ppe-miR168
Prunus persica
UCGCUUGGUGCAGGUCGGGAA
ptc-miR168a-3p
Populus trichocarpa
CCCGCCUUGCAUCAACUGAAU
ptc-miR168a-5p
Populus trichocarpa
UCGCUUGGUGCAGGUCGGGAA
ptc-miR168b-3p
Populus trichocarpa
CCCGCCUUGCAUCAACUGAAU
ptc-miR168b-5p
Populus trichocarpa
UCGCUUGGUGCAGGUCGGGAA
pvi-miR168a
Panicum virgatum
UCGCUUGGUGCAGAUCGGGAC
pvi-miR168b
Panicum virgatum
UCGCUUGGUGCAGAUCGGGAC
rco-miR168
Ricinus communis
UCGCUUGGUGCAGGUCGGGAA
sbi-miR168
Sorghum bicolor
UCGCUUGGUGCAGAUCGGGAC
sit-miR168
Setaria italica
UCGCUUGGUGCAGAUCGGGAC
sly-miR168a-3p
Solanum lycopersicum
CCUGCCUUGCAUCAACUGAAU
sly-miR168a-5p
Solanum lycopersicum
UCGCUUGGUGCAGGUCGGGAC
sly-miR168b-3p
Solanum lycopersicum
CCCGCCUUGCAUCAACUGAAU
sly-miR168b-5p
Solanum lycopersicum
UCGCUUGGUGCAGGUCGGGAC
spo-miR168a
Spirodela polyrhiza
UCGCUUGGUGCAGGUCGGGAA
spo-miR168b
Spirodela polyrhiza
CGCUUGGUGCAGGUCGGGAAC
spo-miR168c
Spirodela polyrhiza
UCGCUUGGUGCAGGUCGGGAA
spo-miR168d
Spirodela polyrhiza
UCGCUUGGUGCAGGUCGGGAA
tcc-miR168
Theobroma cacao
UCGCUUGGUGCAGGUCGGGAA
vvi-miR168
Vitis vinifera
UCGCUUGGUGCAGGUCGGGAA
zma-miR168a-3p
Zea mays
CCCGCCUUGCACCAAGUGAA
zma-miR168a-5p
Zea mays
UCGCUUGGUGCAGAUCGGGAC
zma-miR168b-3p
Zea mays
CCCGCCUUGCAUCAAGUGAA
zma-miR168b-5p
Zea mays
UCGCUUGGUGCAGAUCGGGAC
zos-miR168
Zostera marina
UUGCUUGGUGCAGGUCGGGAA