TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR396a-3p
Arabidopsis lyrata
GUUCAAUAAAGCUGUGGGAAG
aly-miR396a-5p
Arabidopsis lyrata
UUCCACAGCUUUCUUGAACUG
aly-miR396b-3p
Arabidopsis lyrata
GCUCAAGAAAGCUGUGGGAAA
aly-miR396b-5p
Arabidopsis lyrata
UUCCACAGCUUUCUUGAACUU
ath-miR396a-3p
Arabidopsis thaliana
GUUCAAUAAAGCUGUGGGAAG
ath-miR396a-5p
Arabidopsis thaliana
UUCCACAGCUUUCUUGAACUG
ath-miR396b-3p
Arabidopsis thaliana
GCUCAAGAAAGCUGUGGGAAA
ath-miR396b-5p
Arabidopsis thaliana
UUCCACAGCUUUCUUGAACUU
atr-miR396a
Amborella trichopoda
UCCACAGGCUUUCUUGAACAU
atr-miR396b
Amborella trichopoda
UUCCACAGCUUUCUUGAACUU
atr-miR396c
Amborella trichopoda
UUCCACAGCUUUCUUGAACUU
atr-miR396d
Amborella trichopoda
CUCCACGGCUUUCUUGAACUU
atr-miR396e
Amborella trichopoda
UUCCACAGCUUUCUUGAACUU
bdi-miR396a-3p
Brachypodium distachyon
GUUCAAGAAAGUCCUUGGAAA
bdi-miR396a-5p
Brachypodium distachyon
UCCACAGGCUUUCUUGAACUG
bdi-miR396b-3p
Brachypodium distachyon
GUUCAAGAAAGCCCAUGGAAA
bdi-miR396b-5p
Brachypodium distachyon
UCCACAGGCUUUCUUGAACUG
bdi-miR396c-3p
Brachypodium distachyon
GUUCAAUAAAGCUGUGGGAAA
bdi-miR396c-5p
Brachypodium distachyon
UUCCACAGCUUUCUUGAACUG
bdi-miR396d-3p
Brachypodium distachyon
GUUCAAUAAAGCUGUGGGAAA
bdi-miR396d-5p
Brachypodium distachyon
UUCCACAGCUUUCUUGAACUG
bdi-miR396e-3p
Brachypodium distachyon
GGUCAAGAAAGCUGUGGGAAG
bdi-miR396e-5p
Brachypodium distachyon
UUCCACAGCUUUCUUGAACUU
bra-miR396a
Brassica rapa
UUCCACAGCUUUCUUGAACUU
bra-miR396b
Brassica rapa
UUCCACAGCUUUCUUGAACUG
ccl-miR396
Citrus clementina
UUCCACAGCUUUCUUGAACUU
cpa-miR396
Carica papaya
UUCCACAGCUUUCUUGAACUG
cru-miR396a
Capsella rubella
UUCCACAGCUUUCUUGAACUG
cru-miR396b
Capsella rubella
UUCCACAGCUUUCUUGAACUU
csi-miR396a-3p
Citrus sinensis
AUUCAAGAAAGCUGUGGAAAA
csi-miR396a-5p
Citrus sinensis
UUCCACAGCUUUCUUGAACUG
csi-miR396b-3p
Citrus sinensis
GUUCAAUAAAGCUGUGGGAAG
csi-miR396b-5p
Citrus sinensis
UUCCACAGCUUUCUUGAACUG
csi-miR396c
Citrus sinensis
UUCAAGAAAUCUGUGGGAAG
csi-miR396d-3p
Citrus sinensis
UUCAAGAAAUCUGUGGGAAG
csi-miR396e-3p
Citrus sinensis
GCUCAAGAAUGCCGUGGGAAA
csi-miR396e-5p
Citrus sinensis
UUCCACGGCUUUCUUGAACU
csi-miR396f-3p
Citrus sinensis
GCUCAAGAAAGCUGUGGGAGA
csi-miR396f-5p
Citrus sinensis
UUCCACAGCUUUCUUGAACUU
dca-miR396-b2.0r1-15435
Daucus carota
UUCCACGGCUUUCUUGAACUU
dca-miR396-b2.0r1-19325
Daucus carota
UUCCACGGCUUUCUUGAACUG
dca-miR396-b2.0r1-8101
Daucus carota
UUCCACGGCUUUCUUGAACUG
esa-miR396a
Eutrema salsugineum
UUCCACAGCUUUCUUGAACUG
esa-miR396b
Eutrema salsugineum
UUCCACAGCUUUCUUGAACUU
fve-miR396a-3p
Fragaria vesca
GUUCAAUAAAGCUGUGGGAAG
fve-miR396a-5p
Fragaria vesca
UUCCACAGCUUUCUUGAACUG
fve-miR396b-3p
Fragaria vesca
GCUCAAGAAAGCUGUGGGACA
fve-miR396b-5p
Fragaria vesca
UUCCACAGCUUUCUUGAACUU
fve-miR396c-3p
Fragaria vesca
GUUCAAUAAAGCUGUGGGAAG
fve-miR396c-5p
Fragaria vesca
UUCCACAGCUUUCUUGAACUG
fve-miR396d
Fragaria vesca
UUCCACAGCUUUCUUGAACUG
fve-miR396e
Fragaria vesca
UUCCACAGGCUUUCUUGAACU
gma-miR396a-3p
Glycine max
UUCAAUAAAGCUGUGGGAAG
gma-miR396a-5p
Glycine max
UUCCACAGCUUUCUUGAACUG
gma-miR396b-3p
Glycine max
GCUCAAGAAAGCUGUGGGAGA
gma-miR396b-5p
Glycine max
UUCCACAGCUUUCUUGAACUU
gma-miR396c
Glycine max
UUCCACAGCUUUCUUGAACUU
gma-miR396e
Glycine max
UUCCACAGCUUUCUUGAACUGU
gma-miR396h
Glycine max
UCCACAGCUUUCUUGAACUG
gma-miR396i-3p
Glycine max
GUUCAAUAAAGCUGUGGGAAG
gma-miR396i-5p
Glycine max
UUCCACAGCUUUCUUGAACUG
gma-miR396j
Glycine max
AUUCAAGAUAGCUGUGGAAAA
gma-miR396k-3p
Glycine max
GCUCAAGAAAGCUGUGGGAGA
gma-miR396k-5p
Glycine max
UUCCACAGCUUUCUUGAACUU
lus-miR396a
Linum usitatissimum
UUCCACAGCUUUCUUGAACUG
lus-miR396b
Linum usitatissimum
UUCCACAGCUUUCUUGAACUU
lus-miR396c
Linum usitatissimum
UUCCACAGCUUUCUUGAACUG
lus-miR396d
Linum usitatissimum
UCCCACAGCUUUAUUGAACUG
lus-miR396e
Linum usitatissimum
UUCCACAGCUUUCUUGAACUU
mac-miR396a
Musa acuminata
UUCCACAGCUUUCUUGAACUU
mac-miR396b
Musa acuminata
UUCCACGGCUUUCUUGAACUG
mac-miR396c
Musa acuminata
UCCACAGGCUUUCUUGAACUG
mac-miR396d
Musa acuminata
UUCCACAGCUUUCUUGAACGG
mac-miR396e
Musa acuminata
UUCCACAGCUUUCUUGAACUG
mac-miR396f
Musa acuminata
UUCCACAGCUUUCUUGAACUG
mac-miR396g
Musa acuminata
UUCCACAGCUUUCUUGAACUG
mac-miR396h
Musa acuminata
UUCCACAGCUUUCUUGAACUU
mac-miR396i
Musa acuminata
UUCCACAGCUUUCUUGAACUU
mac-miR396j
Musa acuminata
UUCCACAGCUUUCUUGAACUG
mac-miR396k
Musa acuminata
UUCCACGGCUUUCUUGAACUG
mac-miR396l
Musa acuminata
UUCCACAGCUUUCUUGAACUU
mac-miR396m
Musa acuminata
UUCCACAGCUUUCUUGAACUU
mac-miR396n
Musa acuminata
UUCCACAGCUUUCUUGAACUG
mac-miR396o
Musa acuminata
UUCCACAGCUUUCUUGAACGG
mac-miR396p
Musa acuminata
CUCCACAGGCUUUCUUGAACU
mac-miR396q
Musa acuminata
CUCCACAGGCUUUCUUGAACU
mac-miR396r
Musa acuminata
CUUUCCACAGGCUUUCUUGAAC
mac-miR396s
Musa acuminata
GAUUCCACAGGCUUUCUUGAAC
mac-miR396t
Musa acuminata
GUUUUCCACAGCUUUCUUGAACUG
mac-miR396u
Musa acuminata
GUCUUCCACAGCUUUCUUGAACUG
mdm-miR396a
Malus domestica
UUCCACAGCUUUCUUGAACAG
mdm-miR396b
Malus domestica
UUCCACAGCUUUCUUGAACUG
mdm-miR396c
Malus domestica
UUCCACAGCUUUCUUGAACUU
mdm-miR396d
Malus domestica
UUCCACAGCUUUCUUGAACUU
mdm-miR396e
Malus domestica
UUCCACAGCUUUCUUGAACUU
mdm-miR396f
Malus domestica
UUCCACGGCUUUCUUGAACUG
mdm-miR396g
Malus domestica
UUCCACGGCUUUCUUGAACUG
mes-miR396a
Manihot esculenta
UUCCACAGCUUUCUUGAACUG
mes-miR396b
Manihot esculenta
UUCCACAGCUUUCUUGAACUG
mes-miR396c
Manihot esculenta
UUCCACAGCUUUCUUGAACUU
mes-miR396d
Manihot esculenta
UUCCACAGCUUUCUUGAACUU
mes-miR396e
Manihot esculenta
UUCCACAGCUUUCUUGAACUU
mes-miR396f
Manihot esculenta
UUCCACAGCUUUCUUGAACUU
mtr-miR396a-3p
Medicago truncatula
GCUCAAGAAAGCUGUGGGAGA
mtr-miR396a-5p
Medicago truncatula
UUCCACAGCUUUCUUGAACUU
mtr-miR396b-3p
Medicago truncatula
GUUCAAUAAAGCUGUGGGAAG
mtr-miR396b-5p
Medicago truncatula
UUCCACAGCUUUCUUGAACUG
osa-miR396a-3p
Oryza sativa
GUUCAAUAAAGCUGUGGGAA
osa-miR396a-5p
Oryza sativa
UUCCACAGCUUUCUUGAACUG
osa-miR396b-3p
Oryza sativa
GUUCAAUAAAGCUGUGGGAA
osa-miR396b-5p
Oryza sativa
UUCCACAGCUUUCUUGAACUG
osa-miR396c-3p
Oryza sativa
GGUCAAGAAAGCUGUGGGAAG
osa-miR396c-5p
Oryza sativa
UUCCACAGCUUUCUUGAACUU
osa-miR396d
Oryza sativa
UCCACAGGCUUUCUUGAACGG
osa-miR396e-3p
Oryza sativa
AUGGUUCAAGAAAGCCCAUGGAAA
osa-miR396e-5p
Oryza sativa
UCCACAGGCUUUCUUGAACUG
osa-miR396f-3p
Oryza sativa
AUAGUUCAAGAAAGUCCUUGGAAA
osa-miR396f-5p
Oryza sativa
UCUCCACAGGCUUUCUUGAACU
osa-miR396g
Oryza sativa
UCCACAGGCUUUCUUGAACGG
osa-miR396h
Oryza sativa
UCCACAGGCUUUCUUGAACGG
pha-miR396a
Panicum hallii
UUCCACAGCUUUCUUGAACUU
pha-miR396b
Panicum hallii
UUCCACAGCUUUCUUGAACUG
pha-miR396c
Panicum hallii
UCCACAGGCUUUCUUGAACUG
pha-miR396d
Panicum hallii
UUCCACAGCUUUCUUGAACUG
pha-miR396e
Panicum hallii
UCCACAGGCUUUCUUGAACUG
ppe-miR396a
Prunus persica
UUCCACAGCUUUCUUGAACGU
ppe-miR396b
Prunus persica
UUCCACAGCUUUCUUGAACUU
ptc-miR396a
Populus trichocarpa
UUCCACAGCUUUCUUGAACUG
ptc-miR396b
Populus trichocarpa
UUCCACAGCUUUCUUGAACUG
ptc-miR396c
Populus trichocarpa
UUCCACAGCUUUCUUGAACUU
ptc-miR396d
Populus trichocarpa
UUCCACAGCUUUCUUGAACUU
ptc-miR396e-3p
Populus trichocarpa
CUCAAGAAAGCUGUGGGAGA
ptc-miR396e-5p
Populus trichocarpa
UUCCACAGCUUUCUUGAACUU
ptc-miR396f
Populus trichocarpa
UUCCACGGCUUUCUUGAACUG
ptc-miR396g-3p
Populus trichocarpa
CUCAAGAAAGCCGUGGGAAAA
ptc-miR396g-5p
Populus trichocarpa
UUCCACGGCUUUCUUGAACUU
pvi-miR396a
Panicum virgatum
UUCCACAGCUUUCUUGAACUG
pvi-miR396b
Panicum virgatum
UUCCACAGCUUUCUUGAACUG
pvi-miR396c
Panicum virgatum
UUCCACAGCUUUCUUGAACUG
pvi-miR396d
Panicum virgatum
UUCCACAGCUUUCUUGAACUU
pvi-miR396e
Panicum virgatum
UUCCACAGCUUUCUUGAACUU
pvi-miR396f
Panicum virgatum
UCCACAGGCUUUCUUGAACUG
pvi-miR396g
Panicum virgatum
UCCACAGGCUUUCUUGAACUG
rco-miR396
Ricinus communis
UUCCACAGCUUUCUUGAACUU
sbi-miR396a
Sorghum bicolor
UUCCACAGCUUUCUUGAACUG
sbi-miR396b
Sorghum bicolor
UUCCACAGCUUUCUUGAACUG
sbi-miR396c
Sorghum bicolor
UUCCACAGCUUUCUUGAACUU
sbi-miR396d
Sorghum bicolor
CUCCACAGGCUUUCUUGAACUG
sbi-miR396e
Sorghum bicolor
UUCCACAGGCUUUCUUGAACUG
sit-miR396a
Setaria italica
UUCCACAGCUUUCUUGAACUU
sit-miR396b
Setaria italica
UCCACAGGCUUUCUUGAACUG
sit-miR396c
Setaria italica
UUCCACAGCUUUCUUGAACUG
sit-miR396d
Setaria italica
UUCCACAGCUUUCUUGAACUG
sit-miR396e
Setaria italica
UCCACAGGCUUUCUUGAACGA
sly-miR396a-3p
Solanum lycopersicum
GUUCAAUAAAGCUGUGGGAAG
sly-miR396a-5p
Solanum lycopersicum
UUCCACAGCUUUCUUGAACUG
sly-miR396b
Solanum lycopersicum
UUCCACAGCUUUCUUGAACUU
smo-miR396
Selaginella moellendorffii
UUCCACGGCUUUCUUGAACC
spo-miR396a
Spirodela polyrhiza
UUCCACAGCUUUCUUGAACUG
spo-miR396b
Spirodela polyrhiza
UUCCACAGCUUUCUUGAACUG
spo-miR396c
Spirodela polyrhiza
UUCCACGGCUUUCUUGAACGG
spo-miR396d
Spirodela polyrhiza
UUCCACGGCUUUCUUGAACGG
spo-miR396e
Spirodela polyrhiza
UUCCACAGCUUUCUUGAACGG
spo-miR396f
Spirodela polyrhiza
UUCCACGGCUUUCUUGAACUU
stu-miR396-3p
Solanum tuberosum
GUCCAAGAAAGCUGUGGGAAA
stu-miR396-5p
Solanum tuberosum
UUCCACAGCUUUCUUGAACUU
tcc-miR396a
Theobroma cacao
UUCCACAGCUUUCUUGAACUG
tcc-miR396b
Theobroma cacao
UUCCACAGCUUUCUUGAACUG
tcc-miR396c
Theobroma cacao
UUCCACAGCUUUCUUGAACUU
tcc-miR396d
Theobroma cacao
UUCCACGGCUUUCUUGAACUU
tcc-miR396e
Theobroma cacao
UUCCACAGCUUUCUUGAACUU
vvi-miR396a
Vitis vinifera
UUCCACAGCUUUCUUGAACUA
vvi-miR396b
Vitis vinifera
UUCCACAGCUUUCUUGAACU
vvi-miR396c
Vitis vinifera
UUCCACAGCUUUCUUGAACUG
vvi-miR396d
Vitis vinifera
UUCCACAGCUUUCUUGAACUG
zma-miR396a-3p
Zea mays
GUUCAAUAAAGCUGUGGGAAA
zma-miR396a-5p
Zea mays
UUCCACAGCUUUCUUGAACUG
zma-miR396b-3p
Zea mays
GUUCAAUAAAGCUGUGGGAAA
zma-miR396b-5p
Zea mays
UUCCACAGCUUUCUUGAACUG
zma-miR396c
Zea mays
UUCCACAGGCUUUCUUGAACUG
zma-miR396d
Zea mays
UUCCACAGGCUUUCUUGAACUG
zma-miR396e-3p
Zea mays
GGUCAAGAAAGCCGUGGGAAG
zma-miR396e-5p
Zea mays
UUCCACAGCUUUCUUGAACUU
zma-miR396f-3p
Zea mays
GGUCAAGAAAGCUGUGGGAAG
zma-miR396f-5p
Zea mays
UUCCACAGCUUUCUUGAACUU
zma-miR396g-3p
Zea mays
GUUCAAGAAAGCUGUGGAAGA
zma-miR396g-5p
Zea mays
UCCCACAGCUUUAUUGAACUG
zma-miR396h
Zea mays
UCCCACAGCUUUAUUGAACUG
zos-miR396a
Zostera marina
UUCCACGGCUUUCUUGAACUA
zos-miR396b
Zostera marina
UUCCACAGCUUUCUUGAACUU