TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR172a-3p
Arabidopsis lyrata
AGAAUCUUGAUGAUGCUGCAU
aly-miR172a-5p
Arabidopsis lyrata
GUGGCAUCAUCAAGAUUCACA
aly-miR172b-3p
Arabidopsis lyrata
AGAAUCUUGAUGAUGCUGCAU
aly-miR172b-5p
Arabidopsis lyrata
GCAGCACCAUCAAGAUUCACA
aly-miR172c-3p
Arabidopsis lyrata
AGAAUCUUGAUGAUGCUGCAG
aly-miR172c-5p
Arabidopsis lyrata
GGAGCAUCAUCAAGAUUCACA
aly-miR172d-3p
Arabidopsis lyrata
AGAAUCUUGAUGAUGCUGCAG
aly-miR172d-5p
Arabidopsis lyrata
GCAACAUCUUCAAGAUUCAGA
aly-miR172e-3p
Arabidopsis lyrata
GAAUCUUGAUGAUGCUGCAU
aly-miR172e-5p
Arabidopsis lyrata
GCAGCACCAUUAAGAUUCAC
aly-miR172f-3p
Arabidopsis lyrata
AGAAUCUUGAUGAUGCUGCAG
aly-miR172f-5p
Arabidopsis lyrata
GGAGCAUCAUCAAGAUUCACA
ath-miR172a
Arabidopsis thaliana
AGAAUCUUGAUGAUGCUGCAU
ath-miR172b-3p
Arabidopsis thaliana
AGAAUCUUGAUGAUGCUGCAU
ath-miR172b-5p
Arabidopsis thaliana
GCAGCACCAUUAAGAUUCAC
ath-miR172c
Arabidopsis thaliana
AGAAUCUUGAUGAUGCUGCAG
ath-miR172d-3p
Arabidopsis thaliana
AGAAUCUUGAUGAUGCUGCAG
ath-miR172d-5p
Arabidopsis thaliana
GCAACAUCUUCAAGAUUCAGA
ath-miR172e-3p
Arabidopsis thaliana
GGAAUCUUGAUGAUGCUGCAU
ath-miR172e-5p
Arabidopsis thaliana
GCAGCACCAUUAAGAUUCAC
atr-miR172
Amborella trichopoda
GGAAUCUUGAUGAUGCUGCA
bdi-miR172a-3p
Brachypodium distachyon
AGAAUCUUGAUGAUGCUGCAU
bdi-miR172a-5p
Brachypodium distachyon
GCAGCACCACCAAGAUUCACA
bdi-miR172b
Brachypodium distachyon
GGAAUCUUGAUGAUGCUGCAU
bdi-miR172d
Brachypodium distachyon
AGAAUCCUGAUGAUGCUGCAG
bol-miR172a
Brassica oleracea
AGAAUCUUGAUGAUGCUGCAU
bol-miR172b
Brassica oleracea
AGAAUCUUGAUGAUGCUGCA
bol-miR172c
Brassica oleracea
AGAAUCUUGAUGAUGCUGCAU
bra-miR172a
Brassica rapa
AGAAUCUUGAUGAUGCUGCAU
bra-miR172b
Brassica rapa
AGAAUCUUGAUGAUGCUGCAU
bra-miR172c
Brassica rapa
AGAAUCUUGAUGAUGCUGCAG
bra-miR172d
Brassica rapa
GGAAUCUUGAUGAUGCUGCAU
bra-miR172e
Brassica rapa
AGAAUCUUGAUGAUGCUGCAU
bra-miR172f
Brassica rapa
AGAAUCUUGAUGAUGCUGCAG
bra-miR172g
Brassica rapa
AGAAUCUUGAUGAUGCUGCAU
bra-miR172h
Brassica rapa
GGAAUCUUGAUGAUGCUGCAU
bra-miR172i
Brassica rapa
GGAAUCUUGAUGAUGCUGCAU
bra-miR172j
Brassica rapa
GGAAUCUUGAUGAUGCUGCAU
cpa-miR172a
Carica papaya
GGGAAUCUUGAUGAUGCUGCA
cpa-miR172b
Carica papaya
GGGAAUCUUGAUGAUGCUGCA
cru-miR172a
Capsella rubella
AGAAUCUUGAUGAUGCUGCAG
cru-miR172b
Capsella rubella
AGAAUCUUGAUGAUGCUGCAU
cru-miR172c
Capsella rubella
AGAAUCUUGAUGAUGCUGCAG
cru-miR172d
Capsella rubella
AGAAUCUUGAUGAUGCUGCAU
cru-miR172e
Capsella rubella
GGAAUCUUGAUGAUGCUGCAU
csi-miR172a-3p
Citrus sinensis
AGAAUCUUGAUGAUGCUGCA
csi-miR172a-5p
Citrus sinensis
GCAGCGUCCUCAAGAUUCACA
csi-miR172b-3p
Citrus sinensis
AGAAUCUUGAUGAUGCUGCAU
csi-miR172b-5p
Citrus sinensis
GCAGCAUCAUCAAGAUUCACA
csi-miR172c-3p
Citrus sinensis
UGGAAUCUUGAUGAUGCUGCAG
csi-miR172c-5p
Citrus sinensis
GGAGCACCAUCAAGAUUCACA
csi-miR172d-5p
Citrus sinensis
GCGGCAUCAUCAAGAUUCACA
dca-miR172-b2.0r1-16376
Daucus carota
AGAAUCUUGAUGAUGCUGCAU
dca-miR172-b2.0r1-23926
Daucus carota
AGAAUCUUGAUGAUGCUGCAG
dca-miR172-b2.0r1-5508
Daucus carota
AGAAUCUUGAUGAUGCUGCAU
esa-miR172a
Eutrema salsugineum
AGAAUCUUGAUGAUGCUGCAU
esa-miR172b
Eutrema salsugineum
GAAUCUUAAUGAUACUGCAUC
fve-miR172a
Fragaria vesca
AGAAUCUUGAUGAUGCUGCAU
fve-miR172b
Fragaria vesca
AGAAUCUUGAUGAUGCUGCAU
fve-miR172c
Fragaria vesca
AGAAUCUUGAUGAUGCUGCAU
gma-miR172a
Glycine max
AGAAUCUUGAUGAUGCUGCAU
gma-miR172b-3p
Glycine max
AGAAUCUUGAUGAUGCUGCAU
gma-miR172b-5p
Glycine max
GUAGCAUCAUCAAGAUUCAC
gma-miR172c
Glycine max
GGAAUCUUGAUGAUGCUGCAG
gma-miR172d
Glycine max
GGAAUCUUGAUGAUGCUGCAGCAG
gma-miR172e
Glycine max
GGAAUCUUGAUGAUGCUGCAGCAG
gma-miR172f
Glycine max
AGAAUCUUGAUGAUGCUGCA
gma-miR172g
Glycine max
GCAGCACCAUCAAGAUUCAC
gma-miR172h-3p
Glycine max
AGAAUCUUGAUGAUGCUGCAU
gma-miR172h-5p
Glycine max
GCAGCAGCAUCAAGAUUCACA
gma-miR172i-3p
Glycine max
GGAAUCUUGAUGAUGCUGCAU
gma-miR172i-5p
Glycine max
GCAGCAGCAUCAAGAUUCACA
gma-miR172j
Glycine max
GCAGCAGCAUCAAGAUUCACA
gma-miR172k
Glycine max
UGAAUCUUGAUGAUGCUGCAU
gma-miR172l
Glycine max
GGAAUCUUGAUGAUGCUGCAU
gra-miR172a
Gossypium raimondii
GCGGCAUUAUCAAGAUUCACA
gra-miR172b
Gossypium raimondii
GCAGCAUUAUCAAGAUUCACA
lus-miR172a
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172b
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172c
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172d
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172e
Linum usitatissimum
GGAAUCUUGAUGAUGCUGCAG
lus-miR172f
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172g
Linum usitatissimum
GGAAUCUUGAUGAUGCUGCAU
lus-miR172h
Linum usitatissimum
AGAAUCUUGAUGAUGCUGCAU
lus-miR172i
Linum usitatissimum
GGAAUCUUGAUGAUGCUGCAG
lus-miR172j
Linum usitatissimum
GCAGCAUCAUCAAGAUUCCCA
mac-miR172a
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172b
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172c
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172d
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172e
Musa acuminata
AGAAUCUUGAUGAUGCUGCAC
mac-miR172f
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172g
Musa acuminata
GGAAUCUUGAUGAUGCUGCAU
mac-miR172h
Musa acuminata
AGAAUCUUGAUGAUGCUGCAC
mac-miR172i
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172j
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172k
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172l
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172m
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172n
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172o
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172p
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mac-miR172q
Musa acuminata
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172a
Malus domestica
AGAAUCUUGAUGAUGCUGCA
mdm-miR172b
Malus domestica
AGAAUCUUGAUGAUGCUGCA
mdm-miR172c
Malus domestica
AGAAUCUUGAUGAUGCUGCA
mdm-miR172d
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172e
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172f
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172g
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172h
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mdm-miR172i
Malus domestica
GGAAUCUUGAUGAUGCUGCAU
mdm-miR172j
Malus domestica
GGAAUCUUGAUGAUGCUGCAU
mdm-miR172k
Malus domestica
GGAAUCUUGAUGAUGCUGCAU
mdm-miR172l
Malus domestica
GGAAUCUUGAUGAUGCUGCAG
mdm-miR172m
Malus domestica
AGAAUCUUGAUGAUGCUGCAG
mdm-miR172n
Malus domestica
AGAAUCUUGAUGAUGCUGCAG
mdm-miR172o
Malus domestica
AGAAUCUUGAUGAUGCUGCAG
mdm-miR172p
Malus domestica
AGAAUCUUGAUGAUGCUGCAU
mes-miR172a
Manihot esculenta
AGAAUCUUGAUGAUGCUGCAU
mes-miR172b
Manihot esculenta
AGAAUCUUGAUGAUGCUGCAU
mes-miR172c
Manihot esculenta
UGAAUCUUGAUGAUGCUACGC
mes-miR172d
Manihot esculenta
AGAAUCUUGAUGAUGCUGCAU
mes-miR172e
Manihot esculenta
GGAAUCUUGAUGAUGCUGCAG
mes-miR172f
Manihot esculenta
GGAAUCUUGAUGAUGCUGCAG
mtr-miR172a
Medicago truncatula
AGAAUCCUGAUGAUGCUGCAG
mtr-miR172b
Medicago truncatula
AGAAUCUUGAUGAUGCUGCAU
mtr-miR172c-3p
Medicago truncatula
AGAAUCUUGAUGAUGCUGCAU
mtr-miR172c-5p
Medicago truncatula
GUAGCAUCAUCAAGAUUCACA
mtr-miR172d-3p
Medicago truncatula
AGAAUCUUGAUGAUGCUGCA
mtr-miR172d-5p
Medicago truncatula
AGUGGAGCAUCAUCAAGAUUCACA
osa-miR172a
Oryza sativa
AGAAUCUUGAUGAUGCUGCAU
osa-miR172b
Oryza sativa
GGAAUCUUGAUGAUGCUGCAU
osa-miR172c
Oryza sativa
UGAAUCUUGAUGAUGCUGCAC
osa-miR172d-3p
Oryza sativa
AGAAUCUUGAUGAUGCUGCAU
osa-miR172d-5p
Oryza sativa
GCAGCACCAUCAAGAUUCAC
pha-miR172
Panicum hallii
AGAAUCUUGAUGAUGCUGCAU
ppe-miR172a-3p
Prunus persica
AGAAUCUUGAUGAUGCUGCAU
ppe-miR172a-5p
Prunus persica
GUAGCAUCAUCAAGAUUCACG
ppe-miR172b
Prunus persica
AGAAUCUUGAUGAUGCUGCAU
ppe-miR172c
Prunus persica
GGAAUCUUGAUGAUGCUGCAU
ppe-miR172d
Prunus persica
GGAAUCUUGAUGAUGCUGCAG
ptc-miR172a
Populus trichocarpa
AGAAUCUUGAUGAUGCUGCAU
ptc-miR172b-3p
Populus trichocarpa
AGAAUCUUGAUGAUGCUGCAU
ptc-miR172b-5p
Populus trichocarpa
GGAGCAUCAUCAAGAUUCACA
ptc-miR172c
Populus trichocarpa
AGAAUCUUGAUGAUGCUGCAU
ptc-miR172d
Populus trichocarpa
GGAAUCUUGAUGAUGCUGCAU
ptc-miR172e
Populus trichocarpa
GGAAUCUUGAUGAUGCUGCAU
ptc-miR172f
Populus trichocarpa
AGAAUCUUGAUGAUGCUGCAU
ptc-miR172g-3p
Populus trichocarpa
GGAAUCUUGAUGAUGCUGCAG
ptc-miR172g-5p
Populus trichocarpa
GGAGCAUCAUCAAGAUUCACA
ptc-miR172h-3p
Populus trichocarpa
GGAAUCUUGAUGAUGCUGCAG
ptc-miR172h-5p
Populus trichocarpa
GGAGCACCAUCAAGAUUCACA
ptc-miR172i
Populus trichocarpa
AGAAUCCUGAUGAUGCUGCAA
pvi-miR172a
Panicum virgatum
AGAAUCUUGAUGAUGCUGCAU
pvi-miR172b
Panicum virgatum
AGAAUCUUGAUGAUGCUGCAU
pvi-miR172c
Panicum virgatum
AGAAUCUUGAUGAUGCUGCAU
pvi-miR172d
Panicum virgatum
AGAAUCUUGAUGAUGCUGCAU
pvi-miR172e
Panicum virgatum
GGAAUCUUGAUGAUGCUGCAU
pvi-miR172f
Panicum virgatum
GGAAUCUUGAUGAUGCUGCAU
pvi-miR172g
Panicum virgatum
AGAAUCCUGAUGAUGCUGCAU
pvi-miR172h
Panicum virgatum
AGAAUCCUGAUGAUGCUGCAU
rco-miR172
Ricinus communis
GGAAUCUUGAUGAUGCUGCAG
sbi-miR172a
Sorghum bicolor
AGAAUCUUGAUGAUGCUGCA
sbi-miR172b
Sorghum bicolor
GGAAUCUUGAUGAUGCUGCA
sbi-miR172c
Sorghum bicolor
AGAAUCUUGAUGAUGCUGCA
sbi-miR172d
Sorghum bicolor
AGAAUCUUGAUGAUGCUGCA
sbi-miR172e
Sorghum bicolor
UGAAUCUUGAUGAUGCUGCAC
sbi-miR172f
Sorghum bicolor
AGAAUCCUGAUGAUGCUGCAC
sit-miR172a
Setaria italica
AGAAUCUUGAUGAUGCUGCAU
sit-miR172b
Setaria italica
AGAAUCUUGAUGAUGCUGCAU
sit-miR172c
Setaria italica
GGAAUCUUGAUGAUGCUGCAU
sly-miR172a
Solanum lycopersicum
AGAAUCUUGAUGAUGCUGCAU
sly-miR172b
Solanum lycopersicum
AGAAUCUUGAUGAUGCUGCAU
sly-miR172c
Solanum lycopersicum
AGAAUCUUGAUGAUGCUGCAG
sly-miR172d
Solanum lycopersicum
GGAAUCUUGAUGAUGCUGCAG
spo-miR172a
Spirodela polyrhiza
AGAAUCUUGAUGAUGCUGCAU
spo-miR172b
Spirodela polyrhiza
AGAAUCUUGAUGAUGCUGCAU
stu-miR172a-3p
Solanum tuberosum
AGAAUCUUGAUGAUGCUGCAU
stu-miR172a-5p
Solanum tuberosum
GUAGCAUAAUCAAGAUUCACA
stu-miR172b-3p
Solanum tuberosum
AGAAUCUUGAUGAUGCUGCAU
stu-miR172b-5p
Solanum tuberosum
GCAGCACCAUCAAGAUUCACA
stu-miR172c-3p
Solanum tuberosum
AGAAUCUUGAUGAUGCUGC
stu-miR172c-5p
Solanum tuberosum
AGCAUCUUCAAGAUUCACA
stu-miR172d-3p
Solanum tuberosum
GGAAUCUUGAUGAUGCUGCAG
stu-miR172d-5p
Solanum tuberosum
GGAGCAUCAUCAAGAUUCACA
stu-miR172e-3p
Solanum tuberosum
AGAAUCUUGAUGAUGCUGCAU
stu-miR172e-5p
Solanum tuberosum
GCAACAUCAUCAAGAUUCACA
tcc-miR172a
Theobroma cacao
GGAAUCUUGAUGAUGCUGCA
tcc-miR172b
Theobroma cacao
AGAAUCUUGAUGAUGCUGCAU
tcc-miR172c
Theobroma cacao
GGAAUCUUGAUGAUGCUGCAU
tcc-miR172d
Theobroma cacao
AGAAUCCUGAUGAUGCUGCAU
tcc-miR172e
Theobroma cacao
AGAAUCUUGAUGAUGCUGCAU
vvi-miR172a
Vitis vinifera
UGAAUCUUGAUGAUGCUACAU
vvi-miR172b
Vitis vinifera
UGAAUCUUGAUGAUGCUACAC
vvi-miR172c
Vitis vinifera
GGAAUCUUGAUGAUGCUGCAG
vvi-miR172d
Vitis vinifera
UGAGAAUCUUGAUGAUGCUGCAU
zma-miR172a
Zea mays
AGAAUCUUGAUGAUGCUGCA
zma-miR172b-3p
Zea mays
AGAAUCUUGAUGAUGCUGCA
zma-miR172b-5p
Zea mays
CAGCACCAUCAAGAUUCACA
zma-miR172c-3p
Zea mays
AGAAUCUUGAUGAUGCUGCA
zma-miR172c-5p
Zea mays
CAGCACCACCAAGAUUCACA
zma-miR172d-3p
Zea mays
AGAAUCUUGAUGAUGCUGCA
zma-miR172d-5p
Zea mays
CAGCACCAUCAAGAUUCACA
zma-miR172e
Zea mays
GGAAUCUUGAUGAUGCUGCAU
zos-miR172a
Zostera marina
AGAAUCUUGAUGAUGCUGCAU
zos-miR172b
Zostera marina
AGAAUCUUGAUGAUGCUGCAU
zos-miR172c
Zostera marina
AGAAUCUUGAUGAUGCUGCAU
zos-miR172d
Zostera marina
AGAAUCUUGAUGAUGCUGCAU
zos-miR172e
Zostera marina
AGAAUCUUGAUGAUGCUGCAU
zos-miR172f
Zostera marina
AGAAUCUUGAUGAUGCUGCAU