TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR397a-5p
Arabidopsis lyrata
UCAUUGAGUGCAGCGUUGAUG
aly-miR397b-5p
Arabidopsis lyrata
UCAUUGAGUGCAGCGUUGAUG
ath-miR397a
Arabidopsis thaliana
UCAUUGAGUGCAGCGUUGAUG
ath-miR397b
Arabidopsis thaliana
UCAUUGAGUGCAUCGUUGAUG
atr-miR397a
Amborella trichopoda
UCCUUGAGUGCAGCGUUGAUG
atr-miR397b
Amborella trichopoda
UCAUUGAGUGCAGCGUUGGUG
bdi-miR397a
Brachypodium distachyon
UCAUUGAGUGCAGCGUUGAUG
bdi-miR397b-5p
Brachypodium distachyon
AUUGAGUGCAGCGUUGAUGAA
bra-miR397
Brassica rapa
UCAUUGAGUGCAGCGUUGAUGU
cru-miR397a
Capsella rubella
UCAUUGAGUGCAGCGUUGAUGU
cru-miR397b
Capsella rubella
UCAUUGAGUGCAGCGUUGAUAU
csi-miR397-5p
Citrus sinensis
UCAUUGAGUGCAGCGUUGAUG
dca-miR397-b2.0r1-8662
Daucus carota
UUGAGUGCAGCGUUGAUGAUC
fve-miR397
Fragaria vesca
UCAUUGAGUGCAGCGUUGAUG
gma-miR397a
Glycine max
UCAUUGAGUGCAGCGUUGAUG
gma-miR397b-5p
Glycine max
UCAUUGAGUGCAGCGUUGAUG
hvu-miR397a
Hordeum vulgare
CCGUUGAGUGCAGCGUUGAUG
hvu-miR397b-3p
Hordeum vulgare
AUCAACGCUGCACUCAACGGC
lus-miR397a
Linum usitatissimum
AUUGAGUGCAGCGUUGAUGAA
lus-miR397b
Linum usitatissimum
UCAUUGAGUGCAGCGUUGAUG
mac-miR397
Musa acuminata
UUGAGUGCAGCGUUGAUGAGA
mdm-miR397a
Malus domestica
UUGAGUGCAGCGUUGAUGAAA
mdm-miR397b
Malus domestica
UUGAGUGCAGCGUUGAUGAAA
mes-miR397
Manihot esculenta
UUUGAGUGCAGCGUUGAUGA
mes-miR397b
Manihot esculenta
UCAUUGAGUGCAGCGUUGAUG
mtr-miR397-5p
Medicago truncatula
UCAUUGAGUGCAGCGUUGAUG
osa-miR397a
Oryza sativa
UCAUUGAGUGCAGCGUUGAUG
osa-miR397b
Oryza sativa
UUAUUGAGUGCAGCGUUGAUG
pha-miR397
Panicum hallii
UUGAGUGCAGCGUUGAUGAGC
ppe-miR397
Prunus persica
UCAUUGAGUGCAGCGUUGAUG
ptc-miR397a
Populus trichocarpa
UCAUUGAGUGCAGCGUUGAUG
ptc-miR397b
Populus trichocarpa
CCAUUGAGUGCAGCGUUGAUG
ptc-miR397c
Populus trichocarpa
UCAAUGAGUGGAGCUUUGAUG
pvi-miR397a
Panicum virgatum
UUGAGUGCAGCGUUGAUGAGC
pvi-miR397b
Panicum virgatum
UUGAGUGCAGCGUUGAUGAGC
rco-miR397
Ricinus communis
UCAUUGAGUGCAGCGUUGAUG
sbi-miR397-3p
Sorghum bicolor
UCACCGGCGCUGCACUCAAUU
sbi-miR397-5p
Sorghum bicolor
UCAUUGAGUGCAGCGUUGAUG
sly-miR397-5p
Solanum lycopersicum
AUUGAGUGCAGCGUUGAUGA
spo-miR397
Spirodela polyrhiza
UCAUUGAGUGCAGCGUUGAUG
stu-miR397-3p
Solanum tuberosum
CAUCAACGCUACACUCAAUCA
stu-miR397-5p
Solanum tuberosum
AUUGAGUGCAGCGUUGAUGAC
tae-miR397-5p
Triticum aestivum
UCACCGGCGCUGCACACAAUG
tcc-miR397
Theobroma cacao
UCAUUGAGUGCAGCGUUGAUG
vvi-miR397a
Vitis vinifera
UCAUUGAGUGCAGCGUUGAUG
zma-miR397a-5p
Zea mays
UCAUUGAGCGCAGCGUUGAUG
zma-miR397b-5p
Zea mays
UCAUUGAGCGCAGCGUUGAUG