TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR2111a-3p
Arabidopsis lyrata
GUCCUCGGGAUGCGGAUUACC
aly-miR2111a-5p
Arabidopsis lyrata
UAAUCUGCAUCCUGAGGUUUA
aly-miR2111b-3p
Arabidopsis lyrata
AUCCUCGGGAUACAGAUUACC
aly-miR2111b-5p
Arabidopsis lyrata
UAAUCUGCAUCCUGAGGUUUA
aly-miR2111c-3p
Arabidopsis lyrata
GUCCUCGGGAUGCGGAUUACC
aly-miR2111c-5p
Arabidopsis lyrata
UAAUCUGCAUCCUGAGGUUUA
ath-miR2111a-3p
Arabidopsis thaliana
GUCCUCGGGAUGCGGAUUACC
ath-miR2111a-5p
Arabidopsis thaliana
UAAUCUGCAUCCUGAGGUUUA
ath-miR2111b-3p
Arabidopsis thaliana
AUCCUCGGGAUACAGUUUACC
ath-miR2111b-5p
Arabidopsis thaliana
UAAUCUGCAUCCUGAGGUUUA
atr-miR2111
Amborella trichopoda
UAAUCUGUAUCUUGAGGUUUGG
bra-miR2111a
Brassica rapa
UAAUCUGCAUCCUGAGGUUUA
bra-miR2111b
Brassica rapa
UAAUCUGCAUCCUGAGGUUUA
bra-miR2111c
Brassica rapa
AUCCUCGGGAUGCGGAUUACC
bra-miR2111d
Brassica rapa
AUCCUCGGGACACAGAUUACC
bra-miR2111e
Brassica rapa
UAAUCUGCAUCCUGAGGUUUA
bra-miR2111f
Brassica rapa
GACCUCAGGAUGCGGAUUACC
cru-miR2111
Capsella rubella
UCCUCGGGAUACAGAUUACC
csi-miR2111-5p
Citrus sinensis
UAAUCUGCAUCCUGAGGUUUG
fve-miR2111a
Fragaria vesca
UAAUCUGCAUCCUGAGGUUU
fve-miR2111b-3p
Fragaria vesca
GCCCUUGGGAUGCGGAUUACC
fve-miR2111b-5p
Fragaria vesca
UAAUCUGCAUCCUGAGGUUU
fve-miR2111c
Fragaria vesca
UAAUCUGCAUCCUGAGGUUU
gma-miR2111a
Glycine max
GUCCUUGGGAUGCAGAUUACG
gma-miR2111b
Glycine max
UAAUCUGCAUCCUGAGGUUUA
gma-miR2111c
Glycine max
UAAUCUGCAUCCUGAGGUUUA
gma-miR2111d
Glycine max
GUCCUUGGGAUGCAGAUUACG
gma-miR2111e
Glycine max
UAAUCUGCAUCCUGAGGUUUA
gma-miR2111f
Glycine max
UAAUCUGCAUCCUGAGGUUUA
mdm-miR2111a
Malus domestica
UAAUCUGCAUCCUGAGGUUUA
mdm-miR2111b
Malus domestica
UAAUCUGCAUCCUGAGGUUUA
mes-miR2111a
Manihot esculenta
UAAUCUGCAUCCUGAGGUUUA
mes-miR2111b
Manihot esculenta
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111a-5p
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111b
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111c
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111d-5p
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111e-5p
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111f
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111g-5p
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111h
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111i
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111j
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111k
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111m-3p
Medicago truncatula
GUCCUCGGGAUACAGAUUACU
mtr-miR2111m-5p
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111n
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
mtr-miR2111o
Medicago truncatula
UAAUCUGCAUCCUGAGGUUUA
ppe-miR2111a
Prunus persica
UAAUCUGCAUCCUGAGGUUUA
ppe-miR2111b
Prunus persica
UAAUCUGCAUCCUGAGGUUUA
ppe-miR2111c
Prunus persica
UAAUCUGCAUCCUGAGGUUUA
ppe-miR2111d
Prunus persica
UAAUCUGCAUCCUGAGGUUUA
ptc-miR2111a
Populus trichocarpa
UAAUCUGCAUCCUGAGGUUUG
ptc-miR2111b
Populus trichocarpa
UAAUCUGCAUCCUGAGGUUUG
tcc-miR2111
Theobroma cacao
UAAUCUGCAUCCUGAGGUUUA
vvi-miR2111-3p
Vitis vinifera
GUCCUCUGGUUGCAGAUUACU
vvi-miR2111-5p
Vitis vinifera
UAAUCUGCAUCCUGAGGUCUA