TarDB

Precursor miRNA Sequence(5'-3')

GUUGUAUUAAUGCACCCAUCAUAUUAUUUACUCUGUUCCAAAUUAUAGGUUAAUUUAGCUUUUUCUUAAGUCAAACUUUUCUAAUUUUGACAAUUUUAGAAAAUAUAUUAACAUCUACAAGUUCAAAUAAAUGCAAUACCAACUACCAAACAUAUUUCAUGGAGGAUUUAAUGAAACAAACUUGAUGUUGUAGAUGUUGAUGCAUCUUUCUGUAAACUUGGUCAAAGAUAAGUUUGACUUAGGAAAAACUAAAGUGACCUCUCAUUCGGAACCUAUGGAGUACUUCA

miRBase

Precursor miRNA Structure(5'-3')

GUUGUAUUAAUGCACCCAUCAUAUUAUU      ----     A   UAU      A     C                   U   AAUU     --AA   -      -  A               GU    -AUAAAUG  A  CCAA  A   AACA 
                            UACUCU    GUUCC AAU   AGGUUA UUUAG UUUUUCUUAAGUCAAACUU UCU    UUGAC    UUU UAGAAA AU UAUUAACAUCUACAA  UCAA        CA UA    CU CCA    U
                            ||||||    ||||| |||   |||||| ||||| ||||||||||||||||||| |||    |||||    ||| |||||| || |||||||||||||||  ||||        || ||    || |||    A
                            AUGAGG    CAAGG UUA   UCCAGU AAAUC AAAAAGGAUUCAGUUUGAA AGA    AACUG    AAA GUCUUU UA GUAGUUGUAGAUGUU  AGUU        GU AU    GA GGU    U
-----------------------ACUUC      UAUC     C   CUC      G     -                   U   ----     GUUC   U      C  C               GU    CAAACAAA  A  UUAG  -   ACUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.