TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
bdi-miR444a
Brachypodium distachyon
UUGCUGCCUCAAGCUUGCUGC
bdi-miR444b
Brachypodium distachyon
UGCAGUUGCUGCCUCAAGCUU
bdi-miR444c
Brachypodium distachyon
UGCAGUUGUUGUCUCAAGCUU
bdi-miR444d
Brachypodium distachyon
UGCAGUUGUUGUCUCAAGCUU
hvu-miR444a
Hordeum vulgare
UUGCUGCCUCAAGCUUGCUGC
hvu-miR444b
Hordeum vulgare
UGCAGUUGCUGUCUCAAGCUU
osa-miR444a-3p.1
Oryza sativa
UUGCUGCCUCAAGCUUGCUGC
osa-miR444a-3p.2
Oryza sativa
UGCAGUUGCUGCCUCAAGCUU
osa-miR444b.1
Oryza sativa
UGUUGUCUCAAGCUUGCUGCC
osa-miR444b.2
Oryza sativa
UGCAGUUGUUGUCUCAAGCUU
osa-miR444c.1
Oryza sativa
UGUUGUCUCAAGCUUGCUGCC
osa-miR444c.2
Oryza sativa
UGCAGUUGUUGUCUCAAGCUU
osa-miR444d.1
Oryza sativa
UUGCUGCCUCAAGCUUGCUGC
osa-miR444d.2
Oryza sativa
UGCAGUUGCUGCCUCAAGCUU
osa-miR444e
Oryza sativa
UGCAGUUGCUGCCUCAAGCUU
osa-miR444f
Oryza sativa
UGCAGUUGUUGCCUCAAGCUU
tae-miR444a
Triticum aestivum
UUGCUGCCUCAAGCUUGCUGC
tae-miR444b
Triticum aestivum
UUGCUGCCUCAAGCUUGCUGC
zma-miR444a
Zea mays
UGCAGUUGUUGUCUCAAGCUU
zma-miR444b
Zea mays
UGCAGUUGUUGUCUCAAGCUU