TarDB

Precursor miRNA Sequence(5'-3')

CACGCGUCCGACUAGAGGCAGCAACUCCAUAACUUGCGGAAAGCUUGUUGGAUGAUGACCAUGCCAAUGAUUUUACCGAAGUUAUGCAGUUGCUGCCUCAAGCUUGCUGC

miRBase

Precursor miRNA Structure(5'-3')

CAC   UC   -  A            C        G   -    C       -   A 
   GCG  CGA CU GAGGCAGCAACU CAUAACUU CGG AAAG UUGUUGG AUG U
   |||  ||| || |||||||||||| |||||||| ||| |||| ||||||| ||| G
   CGU  GUU GA CUCCGUCGUUGA GUAUUGAA GCC UUUU AGUAACC UAC C
---   -C   C  A            C        -   A    -       G   C

tae-miR444a UUGCUGCCUCAAGCUUGCUGC- tae-miR444b UUGCUGCCUCAAGCUUGCUGC- hvu-miR444a UUGCUGCCUCAAGCUUGCUGC- osa-miR444a-3p.1 UUGCUGCCUCAAGCUUGCUGC- osa-miR444d.1 UUGCUGCCUCAAGCUUGCUGC- bdi-miR444a UUGCUGCCUCAAGCUUGCUGC- osa-miR444b.1 -UGUUGUCUCAAGCUUGCUGCC osa-miR444c.1 -UGUUGUCUCAAGCUUGCUGCC ** ** **************

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.