TarDB

Precursor miRNA Sequence(5'-3')

GACUCGAGAUAUGCAUGUGGCGGCACCGAGCAUGAGGCAACAACUGCAUUACUUGCGGGGAAGGCGCAAGUAGGACACCUGCAUUACUUGCAAACAAGGCGCAAAAUUAAUAGAAGAUCACCAUACUUGUGGCUUUCUUGCAAGUCAUGCAGUUGCUGCCUCAAGCUUGCUGCCUCCCUUUGCCAAAGCUAUCAGAAAAAACAUAAAGUUCUGUUAGUUUCCCUAAACUUUAAAAACAUAAAGUUCUGUUAGUUUCCCUAAACUUUAAAACAUGUUCUACAAAAUUGAUCUAGAAAUGAUUGGCUUACUGUGCUAAUUUAAAGCAAUAUAAUUACUCGACAACUGCAUAUGCACAUGUUAGAAGCAAGGCAGUAGAAUACUUAUGUUUUCAUCUACUGGCAGGUAGCAACAUGUAUAGAUAUAUCA

miRBase

Precursor miRNA Structure(5'-3')

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACUCGAGAUAU   UGU  C    C     A       A         U             G        -  ACAC  G -    --C    AAA 
                                                                                                                                                                                                                                                   GCA   GG GGCA CGAGC UGAGGCA CAACUGCAU ACUUGCGGGGAAG CGCAAGUA GG    CU C AUUA   UUGC   C
                                                                                                                                                                                                                                                   |||   || |||| ||||| ||||||| ||||||||| ||||||||||||| |||||||| ||    || | ||||   ||||   A
                                                                                                                                                                                                                                                   CGU   CC CCGU GUUCG ACUCCGU GUUGACGUA UGAACGUUCUUUC GUGUUCAU CC    GA G UAAU   AACG   G
ACUAUAUAGAUAUGUACAACGAUGGACGGUCAUCUACUUUUGUAUUCAUAAGAUGACGGAACGAAGAUUGUACACGUAUACGUCAACAGCUCAUUAAUAUAACGAAAUUUAAUCGUGUCAUUCGGUUAGUAAAGAUCUAGUUAAAACAUCUUGUACAAAAUUUCAAAUCCCUUUGAUUGUCUUGAAAUACAAAAAUUUCAAAUCCCUUUGAUUGUCUUGAAAUACAAAAAAGACUAUCGAAAC   UUC  U    C     A       C         C             G        A  ACUA  A A    UAA    CGG

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.