TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
aly-miR403a-3p
Arabidopsis lyrata
UUAGAUUCACGCACAAACUCG
aly-miR403a-5p
Arabidopsis lyrata
UGUUUUGUGCGUGACUCUAAUU
aly-miR403b-3p
Arabidopsis lyrata
UUAGAUUCACGCACAAACUCG
aly-miR403b-5p
Arabidopsis lyrata
UGUUUUGUGCGUGACUCUAAUU
ath-miR403-3p
Arabidopsis thaliana
UUAGAUUCACGCACAAACUCG
ath-miR403-5p
Arabidopsis thaliana
UGUUUUGUGCUUGAAUCUAAUU
bra-miR403
Brassica rapa
UUAGAUUCACGCACAAACUCG
cru-miR403
Capsella rubella
UUAGAUUCACGCACAAACUCG
csi-miR403a-3p
Citrus sinensis
UUAGAUUCACGCACAAACUCG
csi-miR403b-3p
Citrus sinensis
UUAGAUUCACGCACAAACUCG
csi-miR403b-5p
Citrus sinensis
AGUUUGUGCGUGAAUCUAACC
esa-miR403
Eutrema salsugineum
UUAGAUUCACGCACAAACUCG
gma-miR403a
Glycine max
UUAGAUUCACGCACAAACUUG
gma-miR403b
Glycine max
UUAGAUUCACGCACAAACUUG
mdm-miR403a
Malus domestica
UUAGAUUCACGCACAAACUCG
mdm-miR403b
Malus domestica
UUAGAUUCACGCACAAACUCG
mes-miR403a
Manihot esculenta
UUAGAUUCACGCACAAACUCG
mes-miR403b
Manihot esculenta
UUAGAUUCACGCACAAACUCG
ppe-miR403
Prunus persica
UUAGAUUCACGCACAAACUCG
ptc-miR403a
Populus trichocarpa
UUAGAUUCACGCACAAACUCG
ptc-miR403b
Populus trichocarpa
UUAGAUUCACGCACAAACUCG
ptc-miR403c-3p
Populus trichocarpa
UUAGAUUCACGCACAAACUCG
ptc-miR403d
Populus trichocarpa
UUAGAUUCACGCACAAACUCG
rco-miR403a
Ricinus communis
UUAGAUUCACGCACAAACUCG
rco-miR403b
Ricinus communis
UUAGAUUCACGCACAAACUCG
sly-miR403-3p
Solanum lycopersicum
CUAGAUUCACGCACAAGCUCG
sly-miR403-5p
Solanum lycopersicum
CGUUUGUGCGUGAAUCUAACA
tcc-miR403a
Theobroma cacao
UUAGAUUCACGCACAAACUCG
tcc-miR403b
Theobroma cacao
UUAGAUUCACGCACAAACUCG
vvi-miR403a
Vitis vinifera
UUAGAUUCACGCACAAACUCG
vvi-miR403b
Vitis vinifera
UUAGAUUCACGCACAAACUCG
vvi-miR403c
Vitis vinifera
UUAGAUUCACGCACAAACUCG
vvi-miR403d
Vitis vinifera
UUAGAUUCACGCACAAACUCG
vvi-miR403e
Vitis vinifera
UUAGAUUCACGCACAAACUCG
vvi-miR403f
Vitis vinifera
UUAGAUUCACGCACAAACUCG