TarDB

Precursor miRNA Sequence(5'-3')

UAAACGGUAAGGUUUUGUUUGGAUGUUGUCGGAUUCACCUCAAUCCACAUGUUUUGGAGUAGAUUAGGGUGGAAUUUAGUUCAAGUUCCACUCCAAUUCACCCCAAUACAUGUGGAUUGAUGCGAAUCCAACUACAUCCAAACAAGGCCUAAAUAUAAGUGUGGAUAGUGUAGAUAAAUAUAGAAGAGAUAGAUAUGAGGAUGGAAAAGGAUC

miRBase

Precursor miRNA Structure(5'-3')

------------------------------------------------------UAAACGGUA                 U  C      A C             U    A  A    A           A 
                                                               AGGUUUUGUUUGGAUGU GU GGAUUC C UCAAUCCACAUGU UUGG GU GAUU GGGUGGAAUUU G
                                                               ||||||||||||||||| || |||||| | ||||||||||||| |||| || |||| ||||||||||| U
                                                               UCCGGAACAAACCUACA CA CCUAAG G AGUUAGGUGUACA AACC CA UUAA CUCACCUUGAA A
CUAGGAAAAGGUAGGAGUAUAGAUAGAGAAGAUAUAAAUAGAUGUGAUAGGUGUGAAUAUAAA                 U  A      C U             U    C  C    C           C

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.