TarDB

Precursor miRNA Sequence(5'-3')

GCACCAACACUACUAUGUGCAGAAACUCUGUUCUUAAGUUGCUUGUGAAUACGAGCCACUUGAAACUGAAAGAAACAAAGAAACAAUAUCAGUAUAAAAUUUUAUCAAAUUAUACUACAAAAAAUGAAAUUUCUUUGUUUAUUUCAAUUUCUAGUGGGUCGUAUUCACAUGCAACUCAAGACUAGAGUAUCUACAACAUGGUCGACUUGGUG

miRBase

Precursor miRNA Structure(5'-3')

G      CA U       - C   A      U    A      U           G     U    C     G           ---  ---AUAUC       AAUUU 
 CACCAA  C ACUAUGU G AGA ACUCUG UCUU AGUUGC UGUGAAUACGA CCACU GAAA UGAAA AAACAAAGAAA   CA        AGUAUAA     U
 ||||||  | ||||||| | ||| |||||| |||| |||||| ||||||||||| ||||| |||| ||||| |||||||||||   ||        |||||||      
 GUGGUU  G UGGUACA C UCU UGAGAU AGAA UCAACG ACACUUAUGCU GGUGA CUUU ACUUU UUUGUUUCUUU   GU        UCAUAUU     C
-      CA C       A A   A      C    C      U           G     U    A     A           AAA  AAAAAACA       AAACU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.