TarDB

Precursor miRNA Sequence(5'-3')

GCACCAACUCUACCAUGUGCAGAAACUAUGGUCUUGAGUUGCCUGUGAAUACGACCCACUGGAAACUAAAAUAAACAAAGAAACAGUAUCAGUGUGAAAUUUCAUAAAAUUAGAGUACAAAGAGACAUGAAAUUUCUUUGUUUACUUCAGUUUUUGAUGGGUCGUAUUCACAUGCAACUCAGGACCAGAGUAUCUACACAUGGUCGACUUGGUG

miRBase

Precursor miRNA Structure(5'-3')

G      C  U        C   A   A              C               C        A  A            ---  -  A  AG    AAAU   AUA 
 CACCAA UC ACCAUGUG AGA ACU UGGUCUUGAGUUGC UGUGAAUACGACCCA UGGAAACU AA UAAACAAAGAAA   CA GU UC  UGUG    UUC   A
 |||||| || |||||||| ||| ||| |||||||||||||| ||||||||||||||| |||||||| || ||||||||||||   || || ||  ||||    |||   A
 GUGGUU AG UGGUACAC UCU UGA ACCAGGACUCAACG ACACUUAUGCUGGGU GUUUUUGA UU AUUUGUUUCUUU   GU CA AG  ACAU    GAG   U
-      C  C        A   A   G              U               A        C  C            AAA  A  G  AA    ----   AUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.