TarDB

Precursor miRNA Sequence(5'-3')

AGAGUGAUUGGAUUCGAUGCUAGGCUUGACAAAGUGAGCAAUCUUAUGUGUUCUCAUCUUUGUUUCGUUGUCUGUUCGACCUUGGUCUCGAUCUCUCCUUAAAACCCUAAUACGUUAUCGUUUAUUUCAUUCAUCUAUCCUUCUUAUGAUCAUCAUACAUGGUAUCGGUUUAUGAUUGAUGGGGUAGAUAGAUGAUCGAAACUUUUGAUUUCUGAGGCUUUUUUUUUUUUUUUAAACAUUUAGUAUACCAGAUAUUACUAGUACACACAUACAUACUGACACGAUAGUCUAUUUGAUGAUUAAGUCUUUACGUUCGUAUACAUACGGAUUUCCCUUUCUUUUGCAUAAAAUCUUAGAUUAUCGUAGGCAUGCGGAUUUACAAUAAGAAAGAUGAUUGUCUAUGGAAUUUAAUGACAUAAAAGGACCUAAAAUAUGGAAACCUUCUUCUGUAAAUCAUUUGAAUGAUUCGGUUGGAGGAAAAUAUAUAUUCCACCGAAUAGGAUAGUUUCAUGUAGAGACUACAUUAUUACAUAUUGACGUGAGAGAGUUCCAUGUAACUAAGCAUGCGCUUGAUGAAUAAACACAUAAGCAAAACCAUGAGCAUAAACAUAUACGUAUACAUGAUUAACUGUGCUGGUAUUGUAUAUGGAUAUCAUGAGAUUGAAAAAGUAGCAAUAACAAAGUAUACAGUUUAUUAGAGUCGUUAAUUCCUAAGGUCAUUUGAUCUCCAUUUUCCCCGUAUCGAUAUGUUUUUUUUUUACUUUUUUUUUUUUUAAUUUUAAUUCUGUGGAGGGAAGUUACAUCUGAUGUAUUAACAAAAAAAGAAAGUUAAAUGUGAUGUUAAAGUCAAAGCCAAGGUCGAGCAGACAACGAAGAUAAGAUGGAACCAGAUCGGGACUACUCCUUUGACAAGUGUUUGCACUGAAUUCAAAAACUUU

miRBase

Precursor miRNA Structure(5'-3')

A    GA         A   -U G     A     U   CAA    -  G  -   U      UG                        CUCGAUCUCUCCUUAAAACCCUAAUACGUUAUCGUUUAUUUCAUUCAUCUAUCCUUCUUAUGAUCAUCAUACAUGGUAUCGGUUUAUGAUUGAUGGGGUAGAUAGAUGAUCGAAACUUUUGAUUUCUGAGGCUUUUUUUUUUUUUUUAAACAUUUAGUAUACCAGAUAUUACUAGUACACACAUACAUACUGACACGAUAGUCUAUUUGAUGAUUAAGUCUUUACGUUCGUAUACAUACGGAUUUCCCUUUCUUUUGCAUAAAAUCUUAGAUUAUCGUAGGCAUGCGGAUUUACAAUAAGAAAGAUGAUUGUCUAUGGAAUUUAAUGACAUAAAAGGACCUAAAAUAUGGAAACCUUCUUCUGUAAAUCAUUUGAAUGAUU 
 GAGU  UUGGAUUCG UGC  A GCUUG CAAAG GAG   UCUU AU UG UUC CAUCUU  UUUCGUUGUCUGUUCGACCUUGGU                                                                                                                                                                                                                                                                                                                                                                                             C
 ||||  ||||||||| |||  | ||||| ||||| |||   |||| || || ||| ||||||  ||||||||||||||||||||||||                                                                                                                                                                                                                                                                                                                                                                                             G
 UUCA  AACUUAAGU ACG  U UGAAC GUUUC CUC   AGGG UA AC AAG GUAGAA  GAAGCAACAGACGAGCUGGAACCG                                                                                                                                                                                                                                                                                                                                                                                             U
U    AA         C   UU G     A     -   AUC    C  G  C   -      UA                        AAACUGAAAUUGUAGUGUAAAUUGAAAGAAAAAAACAAUUAUGUAGUCUACAUUGAAGGGAGGUGUCUUAAUUUUAAUUUUUUUUUUUUUCAUUUUUUUUUUGUAUAGCUAUGCCCCUUUUACCUCUAGUUUACUGGAAUCCUUAAUUGCUGAGAUUAUUUGACAUAUGAAACAAUAACGAUGAAAAAGUUAGAGUACUAUAGGUAUAUGUUAUGGUCGUGUCAAUUAGUACAUAUGCAUAUACAAAUACGAGUACCAAAACGAAUACACAAAUAAGUAGUUCGCGUACGAAUCAAUGUACCUUGAGAGAGUGCAGUUAUACAUUAUUACAUCAGAGAUGUACUUUGAUAGGAUAAGCCACCUUAUAUAUAAAAGGAGGUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.