TarDB: A miRNA Target Database in Plants.


TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA Family

miRNA
Species
Sequence
atr-miR535
Amborella trichopoda
UGACAACGAGAGAGAGCACGC
cpa-miR535
Carica papaya
UGACAACGAGAGAGAGCACGC
csi-miR535a
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
csi-miR535b-5p
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
csi-miR535c-5p
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
csi-miR535d-5p
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
csi-miR535e-5p
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
csi-miR535f-5p
Citrus sinensis
UGACAAUGAGAGAGAGCACAC
fve-miR535a
Fragaria vesca
UGACGAUGAGAGAGAGCACGC
fve-miR535b
Fragaria vesca
UGACGAUGAGAGAGAGCACGC
mac-miR535a
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535b
Musa acuminata
UGACGACGAGAGAGAGCACGC
mac-miR535c
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535d
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535e
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535f
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535g
Musa acuminata
UGACAACGAGAGAGAGCACGC
mac-miR535h
Musa acuminata
UGACAACGAGAGAGAGCACGC
mdm-miR535a
Malus domestica
UGACAACGAGAGAGAGCACGC
mdm-miR535b
Malus domestica
UGACAAGGAGAGAGAGCACGC
mdm-miR535c
Malus domestica
UGACAAGGAGAGAGAGCACGC
mdm-miR535d
Malus domestica
UGACGACGAGAGAGAGCACGC
mes-miR535a
Manihot esculenta
UGACAACGAGAGAGAGCACGU
mes-miR535b
Manihot esculenta
UGACAACGAGAGAGAGCACGG
mes-miR535d
Manihot esculenta
UUGACGACGAGAGAGAGCACG
osa-miR535-5p
Oryza sativa
UGACAACGAGAGAGAGCACGC
pha-miR535
Panicum hallii
UGACAACGAGAGAGAGCACGC
ppe-miR535a
Prunus persica
UGACAACGAGAGAGAGCACGC
ppe-miR535b
Prunus persica
UGACGACGAGAGAGAGCACGC
ppt-miR535a
Physcomitrella patens
UGACAACGAGAGAGAGCACGC
ppt-miR535b
Physcomitrella patens
UGACAACGAGAGAGAGCACGC
ppt-miR535c
Physcomitrella patens
UGACAACGAGAGAGAGCACGC
ppt-miR535d
Physcomitrella patens
UGACAACGAGAGAGAGCACGC
pvi-miR535a
Panicum virgatum
UGACAACGAGAGAGAGCACGC
pvi-miR535b
Panicum virgatum
UGACAACGAGAGAGAGCACGC
rco-miR535
Ricinus communis
UGACAACGAGAGAGAGCACGC
sit-miR535
Setaria italica
UGACAACGAGAGAGAGCACGC
tcc-miR535
Theobroma cacao
UGACAACGAUAGAGAGCACGC
vvi-miR535a
Vitis vinifera
UGACAACGAGAGAGAGCACGC
vvi-miR535b
Vitis vinifera
UGACAACGAGAGAGAGCACGC
vvi-miR535c
Vitis vinifera
UGACAACGAGAGAGAGCACGC