TarDB

Precursor miRNA Sequence(5'-3')

UGACAUGAUGACAUUAUGAGUAAUAUUUUAUAAAAUUAAGGGUAUUUAUGUAUUGUGUUUUGUCGGAAAAUAUGUUUGGAUAGUUUGAUUUUGAAACUGACAUUAUAUUCCGACUGUAUUAUUGGAUAAUACUAUUUUUCGACAAGACACAAUGCAUAAAUGCUCUUAAUUUUAUAAAAUUUAUGAGUAUGCCAUUGUGUCG

miRBase

Precursor miRNA Structure(5'-3')

U         A   U  GA    U                                                UGUUUGGAUAGUUUGAUUUUGAAACUGAC 
 GACAUGAUG CAU AU  GUAA AUUUUAUAAAAUUAAGGGUAUUUAUGUAUUGUGUUUUGUCGGAAAAUA                             A
 ||||||||| ||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||                              
 CUGUGUUAC GUA UG  UAUU UAAAAUAUUUUAAUUCUCGUAAAUACGUAACACAGAACAGCUUUUUAU                             A
G         C   -  AG    -                                                CAUAAUAGGUUAUUAUGUCAGCCUUAUAU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.