TarDB

Precursor miRNA Sequence(5'-3')

AGCAGUAAUCUCUGAUCAUAUUCCAUGAAAGUGUUUUUGGAUAAGAUUUUUUACCAUAGUAAUCACAAAUACUAGAUGACCGUGCUCUUUUGGACAAUAAUUUCUGAUCAAAGCAUUUCCCUUCUAAAAUUCAAGAGAAUGCUUACGGUAGGUCCCUCAUCGAGUGUUUGUGAUUACUACAGUCAGGAAUCUUAUCCAAAGACAAGUCAUGGAAUAUGAGCCGAGAUUGGUGUCUA

miRBase

Precursor miRNA Structure(5'-3')

--A   G       U A             AAG                    U  CA                 A   ----    G    CUUUUGGACAAUAAUUUCUGAUCAAAGCA 
   GCA UAAUCUC G UCAUAUUCCAUGA   UGUUUUUGGAUAAGAUUUUU AC  UAGUAAUCACAAAUACU GAU    GACC UGCU                             U
   ||| ||||||| | |||||||||||||   |||||||||||||||||||| ||  ||||||||||||||||| |||    |||| ||||                              
   UGU GUUAGAG C AGUAUAAGGUACU   ACAGAAACCUAUUCUAAGGA UG  AUCAUUAGUGUUUGUGA CUA    CUGG AUGG                             C
AUC   G       C G             -GA                    C  AC                 G   CUCC    -    CAUUCGUAAGAGAACUUAAAAUCUUCCCU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.