TarDB

Precursor miRNA Sequence(5'-3')

CACUUUGAUUUGGUAAUACAACUAUAGCCAAGACAAUGCUUCAUUAUAAGUGCAUAACUUUUCACUUUAUUGUUUGAGCAUUGUGUUGAUUUCUCUAAACUUGUUUUUCGUUGAACAAGAUUGUUUUUUCAUAUACUCAUGGAAAGCAACACCGUGCUCAGAAGUUAGAGUGAAAUGUUAUGCAUUUGUGAUUAUAUAUUUUCUUGGCUAGAGUUGUAUUGCCAAGUGAAGUGUUUUAAUUG

miRBase

Precursor miRNA Structure(5'-3')

---------      G                A         C    CUUC                U          UUG         U      AUUUCUCUAAACUUGUUUUUCGUUGAAC 
         CACUUU AUUUGGUAAUACAACU UAGCCAAGA AAUG    AUUAUAAGUGCAUAAC UUUCACUUUA   UUUGAGCAU GUGUUG                            A
         |||||| |||||||||||||||| ||||||||| ||||    |||||||||||||||| ||||||||||   ||||||||| ||||||                             
         GUGAAG UGAACCGUUAUGUUGA AUCGGUUCU UUAU    UAGUGUUUACGUAUUG AAAGUGAGAU   AGACUCGUG CACAAC                            A
GUUAAUUUU      -                G         U    AUAU                U          UGA         C      GAAAGGUACUCAUAUACUUUUUUGUUAG

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.