TarDB

Precursor miRNA Sequence(5'-3')

UGUGUGGAUCCUAAGUGUCUCCCCUUGGAAGCCGCAGUUUGGCAUGAAGCACUUAUUCCUUUGCGCAUCCAUUUUGUGACUGCUUGUAUUGAGUCGAAUCCAAUUCCUUGCCUUCUACUUCCUUCCAAUCUAGAUCACUCCUGGUUUUUCACAUUGUUUGGUUGUUGGGGGUCAUAUUGUUUGUAUACCUUUUUUCGCACGAAAUCUUCAAUUUGAAAGACGCUGUUGGAAACUCUAAUUUCGAAUUUCUGCAGCCACACCCAAUAGUUUGAGGUCUUGUCGGUAUCUUCCUUUGCGCGCCUACUUCAGUGACUGCAGAAAGUCACUGCAGUCACUACCGGGGACGAACAUACUAGCACUGUUAAUCUCACUAUACUCGUCAAUCUUCAGUUGUCCAUGCACGAUUUCUCCCUAAAAUUAUUGAGGGGAUAUCAGAGUUUCGUGCCAAGCUGUGUGCAACCAAG

miRBase

Precursor miRNA Structure(5'-3')

----------------------------------------------------------------------------------------------------UGUGUGGAUCCUAAGUGUCUCCCCUUGGAAGCCGCAGUUUGGCAUGAAGCACUUAUUCCUUUGCGCAUCCAUUUUGUGACUGCUUGUAUUGAGUCGAAUCCAAUUCCUUGCCUUCUACUUCCUUCCAAUCUAGAUCACUCCUG        C    -----    -  UGUU      C    U 
                                                                                                                                                                                                                                                   GUUUUUCA AUUG     UUUG GU    GGGGGU AUAU G
                                                                                                                                                                                                                                                   |||||||| ||||     |||| ||    |||||| |||| U
                                                                                                                                                                                                                                                   CAGAAAGU UAAC     AAGC CG    UUUCCA UAUG G
GAACCAACGUGUGUCGAACCGUGCUUUGAGACUAUAGGGGAGUUAUUAAAAUCCCUCUUUAGCACGUACCUGUUGACUUCUAACUGCUCAUAUCACUCUAAUUGUCACGAUCAUACAAGCAGGGGCCAUCACUGACGUCACUGAAAGACGUCAGUGACUUCAUCCGCGCGUUUCCUUCUAUGGCUGUUCUGGAGUUUGAUAACCCACACCGACGUCUUUAAGCUUUAAUCUCAAAGGUUGUCG        U    UUCUA    A  CUUU      -    U

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.