TarDB

Precursor miRNA Sequence(5'-3')

AGGGUGCAUUCCAAGUGCCGUCCCUUGGAAGCCGCAGUUUGGCACGAAGCCCUUUCUCCUGCCGCUACUGUUUUGUUAGUCAGGUUUGCAGCGUGUCUCGAUAUAGUGGUGUGCUUCCGUUGCUAUCCUUUCCCUCCAGGUAGGAAUUCUGUGGCAAACUAGUGGUUGGUUCGCUUAUCAAGUUGCAGUCCUUCAUACCUUGAUUUUGAAUUACUGCAGUCACACCCUUCUUGUCGGCAGUUUUUUUUUUUUUUGUGUGUCCUACCGACUGCACUGACUGCAGAAAGUCGAAGCAAUGGAGGUGUCGUUGCAUUUUCCUCAUAGUUUUGCUAGCUUCUACUUCUGGGUUGAUGUUGAACCCACUCCACCCACUUGUAGCGGAAAGAUGUUAGAAUUUCGUGCCAAGCUGUGUGCAACCAAGGGGUUUGUUACUUCAAAUCCAC

miRBase

Precursor miRNA Structure(5'-3')

AGGGUGCAUUCCAAGUGCCGUCCCUUGGAAGCCGCAGUUUGGCACGAAGCCCUUUCUCCUGCCGCUACUGUUUUGUUAGUCAGGUUUGCAGCGUGUCUCGAUAUAGUGGUGUGCUUCCGUUGCUAUCCUUUCCCUCCAGGUAGGAAUUCUGUGGCAAACUAGUGGUUGGUUCGCUUAUCA   U      ----CUU     CUU  UUUU   UU     A U  CAC 
                                                                                                                                                                                    AGU GCAGUC       CAUAC   GA    GAA  ACUGC G CA   C
                                                                                                                                                                                    ||| ||||||       |||||   ||    |||  ||||| | ||   C
                                                                                                                                                                                    UCA CGUCAG       GUGUG   UU    UUU  UGACG C GU   C
------------CACCUAAACUUCAUUGUUUGGGGAACCAACGUGUGUCGAACCGUGCUUUAAGAUUGUAGAAAGGCGAUGUUCACCCACCUCACCCAAGUUGUAGUUGGGUCUUCAUCUUCGAUCGUUUUGAUACUCCUUUUACGUUGCUGUGGAGGUAACGAAGCUGAAAGACGUCAG   -      CCAUCCU     UUU  -UUU   UU     G U  UCU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.