TarDB

Precursor miRNA Sequence(5'-3')

UCUAACAAUAUAUUUGCAGGUUUUAGGUCUAAGUGGUGAAUAUCGAUCUCUGAAUAUAUUGAUAACCUUCACAAAUUUGCUGAUUAUUUUGUAGAGCUAUUAUUGUCCCACAUGCAUAUCCAUGACUAAAAAAAGCAAAAAAGUAAUAAUGGGGUGUUGUGUUCUCACAAAGAAAGAUGGAAAAGUUUAACAAAAACUUGUGAAGGAAGAUGAAUGCUUUGAUUAUGCAUGAAUCCAUAAUGAUAAAGUGCUAUUGAAUGAUCAAGUAAUUUGUAAGGUUUUUAUUAUCUUCGCAAGAGUUGUAUUGUUAAUUUAGACCUAGACAUGCAAGUAUAUUUCUAGGA

miRBase

Precursor miRNA Structure(5'-3')

-    AC            G    U          GGUG    U   U    ---   U   U   U      C       U   -        U    A   --        -CCCA        UCCAUGACUAAAAAAAGCAAAAAAGUAAUAAUGGGGUGUUGUGUUCUCACA 
 UCUA  AAUAUAUUUGCA GUUU AGGUCUAAGU    AAUA CGA CUCU   GAA AUA UGA AACCUU ACAAAUU GCU GAUUAUUU GUAG GCU  AUUAUUGU     CAUGCAUA                                                   A
 ||||  |||||||||||| |||| ||||||||||    |||| ||| ||||   ||| ||| ||| |||||| ||||||| ||| |||||||| |||| |||  ||||||||     ||||||||                                                   A
 GGAU  UUAUAUGAACGU CAGA UCCAGAUUUA    UUAU GUU GAGA   CUU UAU AUU UUGGAA UGUUUAA UGA CUAGUAAG UAUC UGA  UAGUAAUA     GUACGUAU                                                   A
A    CU            A    -          AUUG    -   -    ACG   C   U   U      -       -   A        U    G   AA        CCUAA        UAGUUUCGUAAGUAGAAGGAAGUGUUCAAAAACAAUUUGAAAAGGUAGAAA

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.