TarDB

Precursor miRNA Sequence(5'-3')

UCUAGCAAUAUAUUUGCAGGUUUUAGGUCUAAGUGGUGAAUAUCGAUCUCUGAAUAUAUUGAUAACCUUCACAAAUUUGCUGAUUAUUUUUGUAGCGCUCUUUCAUGAGAAAUGAUUGUCCCACAUGCAUAUCCAUGACUAAAAAAAGCAAAAAAGUAAUAAUUGGGUGUUGUGUUCUCACAAAGAAAGAUGGAAAAGUUUAACAAAAACUUGUGAAGGAAGAUGAAUGCUUUGAUUAUGCAUGAAUCCAUAAUGAUAAAGUGCUAUUGAAUGAUCAAGUAAUUUGUAAGGUUUUUAUUAUCUUCGCAAGAGUUGUAUUGUUAAUUUAGACCUAGACAUGCAAGUAUAUUUCUAGG

miRBase

Precursor miRNA Structure(5'-3')

U    C            G    U          GGUG    U   U    ---   U   U   U      C       U   -        UU        CUUUCAUGAGAAAUGAUUGUCCCACAUGCAUAUCCAUGACUAAAAAAAGCAAAAAAGUAAUAAUUGGGUGUUGUGUUCU 
 CUAG AAUAUAUUUGCA GUUU AGGUCUAAGU    AAUA CGA CUCU   GAA AUA UGA AACCUU ACAAAUU GCU GAUUAUUU  GUAGCGCU                                                                               C
 |||| |||||||||||| |||| ||||||||||    |||| ||| ||||   ||| ||| ||| |||||| ||||||| ||| ||||||||  ||||||||                                                                                
 GAUC UUAUAUGAACGU CAGA UCCAGAUUUA    UUAU GUU GAGA   CUU UAU AUU UUGGAA UGUUUAA UGA CUAGUAAG  UAUCGUGA                                                                               A
G    U            A    -          AUUG    -   -    ACG   C   U   U      -       -   A        -U        AAUAGUAAUACCUAAGUACGUAUUAGUUUCGUAAGUAGAAGGAAGUGUUCAAAAACAAUUUGAAAAGGUAGAAAGAAAC

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.