TarDB

Precursor miRNA Sequence(5'-3')

GAUUAAAUUAUAUUUUGGGUAAAUAGUCAUUUUCAUCCCUGAAUGUGUAGAGCGCUAACAAAUUCGUCCUUAAAUGUGUCACAUAGGCUUUUUCAUUAACGGUAACAAAUGGACAGAUUUGUCGCAUUUUUUUCACUUUUAGAGACUAAAAUUUGAAUUUUUAUCUUUCGGAGACGAAUUUAUUAGUGCUCUGCACAUUCAAGGACAAAAAUGAUUAUUUACCCUUUAAAAUAAGUUUGGCAU

miRBase

Precursor miRNA Structure(5'-3')

-- A       A      ---                 CA   C                   C         -  UAAAUGUGUCACAUAGGCUUUUUCAUUAACGGUAACAAAUGGACAGAU 
  G UUAAAUU UAUUUU   GGGUAAAUAGUCAUUUU  UCC UGAAUGUGUAGAGCGCUAA AAAUUCGUC CU                                                U
  | ||||||| ||||||   |||||||||||||||||  ||| ||||||||||||||||||| ||||||||| ||                                                U
  C GGUUUGA AUAAAA   CCCAUUUAUUAGUAAAA  AGG ACUUACACGUCUCGUGAUU UUUAAGCAG GG                                                C
UA -       -      UUU                 AC   A                   A         A  CUUUCUAUUUUUAAGUUUAAAAUCAGAGAUUUUCACUUUUUUUACGCU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.