TarDB

Precursor miRNA Sequence(5'-3')

UGGAUCAUGCUUCUAUUUAUAAGCUCAUUGAAGUAACUCUCUCCGAGCUCAAAUAGGCCAAUUUUUUGUUUGUGUGAUACACAAAACCUUCAGCUACCCACUUCCAUAUCAAAUCAUCUCUCUUGGUUUUCUUGUCUUUUGGAAAUAUACUUUGAUAUGAUAAAAGAUGAGAAGGUAGAUCCUAGCUAGAACAACAUCAUAUUAAGUCUUUAGUCUCAAGUAAGUCCGGGUAGGCUAGAGAUGAAAUCCAAUAGGAGCUUAACGUUGUUUCAGGUAGUGUACAACUUGUUAGUAAAAGAUGCUUACUUGUAGAUUAUGCCAAACCAUGAUCUAUAAGUCAAGUCUCUUUUACUAAUAGUUUUGAUCCACCUUCUCAUCUUUAGUGUUAGUUAUCAUAUUUAACUAUGUAUUCAGAAGAUUAGAAGAUUAUGAGAGAUAACUUGAUAUGUAAGUGGGUAGUUGAAUGUUUUGUUUAUCAUGAAAACAAGAAAUUAGCCUACGUGAGCCCGGAGAGAGUAACUCAAUGAGCACAUAAAUAGAAGCAUGAUUCAACCAAUAGACACCGAUGACGACUGUGAAGGCAAGGAAAUGUAUUAUU

miRBase

Precursor miRNA Structure(5'-3')

UGGAUCAUGCUUCUAUUUAUAAGCUCAUUGAAGUAACUCUCUCCGAGCUCAAAUAGGCCAAUUUUUUGUUUGUGUGAUACACAAAACCUUCAGCUACCCACUUCCAUAUCAAAUCAUCUCUCUUGGUUUUCUUGUCUUUUGGAAAUAUACUUUGAUAUGAUAAAAGAUGAGAAGGUAGAUCCUAGCUAGAACAACAUCAUAUUAAGUCUUUAGUCUCAAGUAAGUCCGGGUAGGCUAGAGAUGAAAUCCAAUAGGAGCUUAACGUUGUUUCAGGUAGUGUAC    U            U    -              CC 
                                                                                                                                                                                                                                                                                          AACU GUUAGUAAAAGA GCUU ACUUGUAGAUUAUG  A
                                                                                                                                                                                                                                                                                          |||| |||||||||||| |||| ||||||||||||||   
                                                                                                                                                                                                                                                                                          UUGA UAAUCAUUUUCU UGAA UGAAUAUCUAGUAC  C
--------------------------------------------UUAUUAUGUAAAGGAACGGAAGUGUCAGCAGUAGCCACAGAUAACCAACUUAGUACGAAGAUAAAUACACGAGUAACUCAAUGAGAGAGGCCCGAGUGCAUCCGAUUAAAGAACAAAAGUACUAUUUGUUUUGUAAGUUGAUGGGUGAAUGUAUAGUUCAAUAGAGAGUAUUAGAAGAUUAGAAGACUUAUGUAUCAAUUUAUACUAUUGAUUGUGAUUUCUACUCUUCCACCUAGUU    -            C    C              CA

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.