TarDB

Precursor miRNA Sequence(5'-3')

AUGUAUAAGAGGUGAGACUGUUGGCUUUAAUCCUACCAAUAACUUCAGCUGCAUCAUGAAGAGUAGACAGAGAUUCUGGCGGUUGAGGGUUUCUUCGUAGAGGUUGAUCGAUUCUUAAUGUCCUGUGGAUUUUAAGUUCCCAAAACUGUUGCUUAGGACAUACAAGAUCGUUCAAUGUCCAAGAAGAAACCUGAGCCGCUACAAUCAUCGGUCUAAUCUCUUUAGCAGAUGAAGUUAUUUGUGGUAUAAAACCCACAGUUUUAUCAUGCAU

miRBase

Precursor miRNA Structure(5'-3')

      AAGA           U  C    AU  U  C          G    AUCA       --     A  -    C        GA          GUA  G     U    U   -A        U G UUUUA    C 
AUGUAU    GGUGAGACUGU GG UUUA  CC AC AAUAACUUCA CUGC    UGAAGAG  UAGAC GA GAUU UGGCGGUU  GGGUUUCUUC   GA GUUGA CGAU CUU  AUGUCCUG G A     AGUU C
||||||    ||||||||||| || ||||  || || |||||||||| ||||    |||||||  ||||| || |||| ||||||||  ||||||||||   || ||||| |||| |||  |||||||| | |     |||| C
UACGUA    CUAUUUUGACA CC AAAU  GG UG UUAUUGAAGU GACG    AUUUCUC  AUCUG CU CUAA AUCGCCGA  UCCAAAGAAG   CU UAACU GCUA GAA  UACAGGAU C U     UCAA A
      ----           C  A    AU  -  U          A    ----       UA     G  A    C        -G          AAC  G     U    -   CA        U G ---UG    A

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.