TarDB

Precursor miRNA Sequence(5'-3')

CAUUUUCUUGUAUUCAAAGUAUCUUAAGUUAAGAAGAGAAUAAGAUUCUUACAUCUUGAUGAAGAGGAAUGGGAAGCCGAAAUCUAAACUGAAACAGAGGCGUCACCCAAUUAUCAAUUGGUAAGUGAUAUCUAUGUUUCGAUCUGUAUCUCGGCCUUUCACUCCUCUUCUUCUUGAUGUAAGAAUUUGUUAUUCGACACAUUAGAUGGAGUGAAAAAUCUGUUAGAUAU

miRBase

Precursor miRNA Structure(5'-3')

CAUUUUCUUGUAUUCAAAGUAUCUUAAGUUAAGAAGA      --            UU  U        A     A     AAUCUAAAC       G   C     ---        
                                     GAAUAA  GAUUCUUACAUC  GA GAAGAGGA UGGGA GCCGA         UGAAACA AGG GUCAC   CCAAUUA 
                                     ||||||  ||||||||||||  || |||||||| ||||| |||||         ||||||| ||| |||||   |||||| U
                                     CUUAUU  UUAAGAAUGUAG  CU CUUCUCCU ACUUU CGGCU         GCUUUGU UCU UAGUG   GGUUAAA 
--UAUAGAUUGUCUAAAAAGUGAGGUAGAUUACACAG      GU            UU  U        C     C     CUAUGUCUA       A   A     AAU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.