TarDB

Precursor miRNA Sequence(5'-3')

CGUAAAGCAGGUGAUUCACCAAUUUAGGUUUACAUCCACAGUGUGGAAGACACUGAAGGACCUAAACUAACAAAGGUAAACGGCUCAGUGUGCGGGGUAUUACACUCGGUUUAAUGUCUGAAUGCGAUAAUCCGCACGAUGAUCUCUUUAUCUUUGUUUGUUUAGGUCCCUUAGUUUCUUCUAUACCGUGAAUCCAAUCCUGUAUUGGAUGAGCUGGUUUAUGACC

miRBase

Precursor miRNA Structure(5'-3')

---      G   G G  UCA     U    UUUACAUC   A          C     A          U            C  C   G        G    A  C    UUU 
   CGUAAA CAG U AU   CCAAU UAGG        CAC GUGUGGAAGA ACUGA GGACCUAAAC AACAAAGGUAAA GG UCA UGUGCGGG UAUU CA UCGG   A
   |||||| ||| | ||   ||||| ||||        ||| |||||||||| ||||| |||||||||| |||||||||||| || ||| |||||||| |||| || ||||    
   GUAUUU GUC A UA   GGUUA GUCC        GUG CAUAUCUUCU UGAUU CCUGGAUUUG UUGUUUCUAUUU UC AGU GCACGCCU AUAG GU AGUC   G
CCA      G   G G  ---     U    UAACCUAA   C          U     C          U            C  U   A        A    C  A    UGU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.