TarDB

Precursor miRNA Sequence(5'-3')

GAUUCGGGGCUCGUAAAGCAGGUGAUUCACCAAUUCAGGUUUACAUCCGCAGUGUGGAAGACACUAAAGGACCUAAACUAACAAAGAGAAACAGCUCAUUGUGCGGGGUAUUACACUCUUAAUGUCUGAAUGCGAUAAUCCGCACGAUGAUCUCUUUAUCUUUGUUUGUUUAGGUCCCUUAGUUUCUUCUAUACCGCGAAUGAAAUCCUAUGUUGGACGAAUCAACUUGGUUUACGAUUUCCAAAUC

miRBase

Precursor miRNA Structure(5'-3')

    C    C       G     -     -A     UC   U  A   C   A          C     A          U        G   C  C            G    A  C  UUA 
GAUU GGGG UCGUAAA CAGGU GAUUC  CCAAU  AGG UU CAU CGC GUGUGGAAGA ACUAA GGACCUAAAC AACAAAGA AAA AG UCAUUGUGCGGG UAUU CA UC   A
|||| |||| ||||||| ||||| |||||  |||||  ||| || ||| ||| |||||||||| ||||| |||||||||| |||||||| ||| || |||||||||||| |||| || ||   U
CUAA CCUU AGCAUUU GUUCA CUAAG  GGUUG  UCC AA GUA GCG CAUAUCUUCU UGAUU CCUGGAUUUG UUGUUUCU UUU UC AGUAGCACGCCU AUAG GU AG   C
    A    U       G     A     CA     UA   U  A   A   C          U     C          U        A   C  U            A    C  A  UCU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.