TarDB

Precursor miRNA Sequence(5'-3')

AGUAACGAAAUUCUUUACAUAUACAUGUGUAUGUAAAUAUUUUUGUUACUAUUUGAACCGCACCGCAUUUUAUCCGCAGUUGAAUCGCACGUCUCCACUCGGAACCAAUGAGUCUGAAUGAUGACUGCGUUUUGCGGUGCGGGAGAAGUGCGGUGCAGUUCAAAUAGUAACGAAAAUACAUAGAUACAUAUGUAUAUAUAGAGAUUUUGAUACU

miRBase

Precursor miRNA Structure(5'-3')

    A      U     C              G  AA                     C            A      G -    U    C   UC  C     A CA 
AGUA CGAAAU CUUUA AUAUACAUGUGUAU UA  UAUUUUUGUUACUAUUUGAAC GCACCGCAUUUU UCCGCA U UGAA CGCA GUC  CA UCGGA C  A
|||| |||||| ||||| |||||||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||| | |||| |||| |||  || ||||| |   
UCAU GUUUUA GAGAU UAUAUGUAUACAUA AU  AUAAAAGCAAUGAUAAACUUG CGUGGCGUGAAG GGGCGU G GUUU GCGU CAG  GU AGUCU G  A
    A      -     A              G  AC                     A            A      G C    U    -   UA  A     - AG

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.