TarDB

Precursor miRNA Sequence(5'-3')

GAAUCUGUUGAAGUACCUUUCUCGGCACUUGAGGAUGUCAACUGACCAGCUCUCGUAUUUCAUGUCAUAAUAAUAGUCACACUAGGGUGAUAUAACGAGGAGAGAGUUAUAUCAUCCUAGCGCGAUUGUUUUUAUGACAUGAAAUACGUUUUAGAACUUAAAACACUUUGACCUUCUUAAGUGCUGAUAAUGUUUCUUAAUUAUGUUU

miRBase

Precursor miRNA Structure(5'-3')

-GAAUCU     AGU  CU  C              U     -C  --ACC  C   ----                 U       A A               GAG 
       GUUGA   AC  UU UCGGCACUUGAGGA GUCAA  UG     AG UCU    CGUAUUUCAUGUCAUAA AAUAGUC C CUAGGGUGAUAUAAC   G
       |||||   ||  || |||||||||||||| |||||  ||     || |||    ||||||||||||||||| ||||||| | |||||||||||||||   A
       UAAUU   UG  AA AGUCGUGAAUUCUU CAGUU  AC     UC AGA    GCAUAAAGUACAGUAUU UUGUUAG G GAUCCUACUAUAUUG   G
UUUGUAU     CUU  -U  U              C     UC  AAAAU  A   UUUU                 U       C C               AGA

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.