TarDB

Precursor miRNA Sequence(5'-3')

UCUAGAGGGUGGUGCAACAUCUCUGGAUGUAAAUGGUACUCUUACAAAUGGUGAUGGUGAAAAGAAAAGGAGCAGCUUGUUAGUCUGAACUCGGUCUAGUUCAAACCAAAACAUCUUUUCAUCCUUGAAAUUCUCUGCAAUUACAAGGUUGAACUUUUUUUCAACCAAGGGCUCACACCGCACUAGGACUCAUACUAUUACCUUACUCUUGUGACAAAAAUUGCAUUAAAGAGAUACGUUUCGGGUUGGAGGAAGUUUGGGGUACGGGUCCUAAUGUCAUGUGAAGAAAAGUUCAGCCCAAUAAUUGCAGAGAAACAUAUGUUUGGUUUGAACUAGACCGAUGUCAACAAACAAGCUGCUUCGUUUCUAUUCACCAUCAACAUCUUUAAUUGCACCAUCGACGUCCAGAAAUGCUGCACCACCCCUCUAGA

miRBase

Precursor miRNA Structure(5'-3')

         -       A   C         AA     A UC   CAA   G          A     A             A  C   AC                    A   CUUUUCAUCCUUGAAAUUCUCUGCAAUUACAAGGUUGAACUUUUUUUCAACCAAGGGCUCACACCGCACUAGGACUCAUACUAUUACCUUACUCUUGUGAC 
UCUAGAGGG UGGUGCA CAU UCUGGAUGU  AUGGU C  UUA   AUG UGAUGGUGAA AGAAA GGAGCAGCUUGUU GU UGA  UCGGUCUAGUUCAAACCAAA CAU                                                                                                     A
||||||||| ||||||| ||| |||||||||  ||||| |  |||   ||| |||||||||| ||||| ||||||||||||| || |||  |||||||||||||||||||| |||                                                                                                      
AGAUCUCCC ACCACGU GUA AGACCUGCA  UACCA G  AAU   UAC ACUACCACUU UCUUU CUUCGUCGAACAA CA ACU  AGCCAGAUCAAGUUUGGUUU GUA                                                                                                     A
         C       C   A         GC     C UU   UUC   A          A     G             A  -   GU                    -   UACAAAGAGACGUUAAUAACCCGACUUGAAAAGAAGUGUACUGUAAUCCUGGGCAUGGGGUUUGAAGGAGGUUGGGCUUUGCAUAGAGAAAUUACGUUAAA

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.