TarDB

Precursor miRNA Sequence(5'-3')

AUGCUGCUCGGACUCUUCAAAAAUGCCGUUGGGUUCGUGUCGGAUCCUCCAAAAGUAGUGGAUUUUUGGAUGAUCCGGCAAGAGUGCGUCAGCAUUAUAGAGAGUGCGAGCAACAUAC

miRBase

Precursor miRNA Structure(5'-3')

--   C      G      CAAA     C U  G    G         C         A 
  AUG UGCUCG ACUCUU    AAUGC G UG GUUC UGUCGGAUC UCCAAAAGU G
  ||| |||||| ||||||    ||||| | || |||| ||||||||| ||||||||| U
  UAC ACGAGC UGAGAG    UUACG C GC UGAG ACGGCCUAG AGGUUUUUA A
CA   A      G      -AUA     A U  G    A         U         G

stu-miR5303g -AUAUUUUUGAAGAGUCUGAGCAAC stu-miR5303i -AUAUUUUUGAAGAGUCUGAGCAAC stu-miR5303j AAUAUUUUUGAAGAGUCUGAGCAA- stu-miR5303h AACAUUUUUGAAGAGUCUGAGCAA- sly-miR5303 ----UUUUUGAAGAGUUCGAGCAAC stu-miR7997a -AUGCUGCUCGGACUCUUCAAA--- stu-miR7997b -AUGCUGCUCGGACUCUUCAAA--- stu-miR7997c -AUAUUGCUCGGACUCUUCAAAAAU * * *

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.