TarDB

Precursor miRNA Sequence(5'-3')

AAAAGUGUGUGUAUGCGGAAGUUGGAGAAAACCCAGACUUCAUUGCUCGAUGAAGCAUGUAGCUUCGCAGUCGUACUUCUUGCACUCCUCCAUCUCUCGCAUCUCUUGCGCAUUGUGGUUCUCCAACACCUGCACAGCGGCGGUCUUGUCCGGAUUAGGGAUCGUCUACACCAGAUAAGCCACGGCGUUUUUCUCGGAGAAAAAUACCAUCCUUUGGUUCAACAACGGUUGCUGCGUUUUCCACGUUCGGAUACAACCCUGCCCAGUUGCUGUGAGAGAUUGACGAGUGCAAGAAGACCCUCUUUCCAUGUUCCAGACGCA

miRBase

Precursor miRNA Structure(5'-3')

AAAAGUG     AUGC    GU      AAACCCAGACUUCAUUGCUCGAUGAAGCAUGUAGCUUCGCAGUCGUACUUCUUGCACUCCUCCAUCUCUCGCAUCUCUUGCGCAUUGUGGUUCUCCAACACCUGCACAGCGGCGGUCUUGUCCGGAUUAGGGAUCG 
       UGUGU    GGAA  UGGAGA                                                                                                                                        U
       |||||    ||||  ||||||                                                                                                                                         
       ACGCA    CCUU  ACCUUU                                                                                                                                        A
-------     --GA    GU      CUCCCAGAAGAACGUGAGCAGUUAGAGAGUGUCGUUGACCCGUCCCAACAUAGGCUUGCACCUUUUGCGUCGUUGGCAACAACUUGGUUUCCUACCAUAAAAAGAGGCUCUUUUUGCGGCACCGAAUAGACCACAU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.