TarDB

Precursor miRNA Sequence(5'-3')

UUUGAGAGAUUGAAGCUGCCAGCAUGAUCUGGUAAUCAACCUUUUUGUAUAUAUAUAUAUAUAUUAAUUCCUUAUAGUUUUUAGAUUUAAUUUCUUUUAAUUAGAUCCAUGGUUUCAAUUCUAUUGAAUAAAUGGUGGGGUUUUAUAUUUUCGUGCAAUUAUUAAGAGGAUAGAUGGAAUAGCGCCUUUAAAUCCAAUCACUUUUUUAGUUUUAUUUUGAUCUUUUUUGCCCCCUAAAAUUAAGGGUAAAGGUUAAUAUGUGAGAGAGUUUUAGGGUGUGAUUUAUUAGCUUCGUAGAUGAAUGGUUCCAUCAGGUCAUCUUGCAGCUUCAAUUACUCAUU

miRBase

Precursor miRNA Structure(5'-3')

UUUGAGAGAUUGAAGCUGCCAGCAUGAUCUGGUAAUCAACCUUUUUGUAUAUAUAUAUAUAUAUUAAUUCCUUAUAGUUUUUAGAUUUAAUUUCUUUUAAUUAGAUCCAUGGUUUCAAUUCUAUUGAAUAAAUGGUGGGGUUUUAUAUUUUCGUGCAAUUAUUAAGAGGAUAGAUGGAAUA       U    C AA    UUUUUUAGUUUUAUU        UUU     CCUA 
                                                                                                                                                                                     GCGCCUU AAAU C  UCAC               UUGAUCUU   UGCCC    A
                                                                                                                                                                                     ||||||| |||| |  ||||               ||||||||   |||||    A
                                                                                                                                                                                     UGUGGGA UUUG G  AGUG               AAUUGGAA   AUGGG    U
-----------------------------------------------------------------------------------------------------------------------UUACUCAUUAACUUCGACGUUCUACUGGACUACCUUGGUAAGUAGAUGCUUCGAUUAUUUAG       U    A AG    ------------UAU        ---     AAUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.