TarDB

Precursor miRNA Sequence(5'-3')

UUUAUCCUAAACAUCCUAUUAAGUUUUUAUGCUGAAACAAAGCUCAAAGCUCAGAGCUAAGGCGCUUAUCUUCUUUGAUAUUGCAUGGAGUAUGCUUCUACUUCUCUAGGAGAUGCGUUUUAUGGAAAUAUCAAAGAAGAUAAGCGCCUUAGUUCUGAAGAUAAGCGCCUUAUUCACAAAAUGCAUAAGGUUGUAUUCUUUGUUAGGU

miRBase

Precursor miRNA Structure(5'-3')

UUUAUCCUAAACAUCCUAUUAAGUUUUUAUGCUGAAACAAAGCUCAAAGCU                               -G      --    G      CU 
                                                   CAGAGCUAAGGCGCUUAUCUUCUUUGAUAUU  CAUGGA  GUAU CUUCUA  U
                                                   |||||||||||||||||||||||||||||||  ||||||  |||| ||||||   
                                                   GUCUUGAUUCCGCGAAUAGAAGAAACUAUAA  GUAUUU  CGUA GAGGAU  C
UGGAUUGUUUCUUAUGUUGGAAUACGUAAAACACUUAUUCCGCGAAUAGAA                               AG      UG    -      CU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.