TarDB

Precursor miRNA Sequence(5'-3')

UGCUCGAUUCUUCAGAUAGAAAUUCUGGUCAUCUUUGUGUUUAGGCUUUUUCUUGCAUAUGUUCUUUAUCUCUAUUGAUUGAUAUUGUUCAAUGAGCAACAUACUUUUCUCUUCUACCUGGAUUUGUUUGAUGGUUUUAAGAACUCUGUUCUUUUUGACGUUUUACCCAACAAUAUAACUUCUGUUGUAGUCAUCUUCUGCUGCAACCCAUCCACAAAGCUUAUCAUGCAAGAUUAAACCCUUUCUCGAUGGGUUGCAAGAGAACAUCACUAAAAUAGAAGUAACAUUGUUGGGGAAAAACGUCACAAAUCCAGGUAUUAGAGAAUAGGAUGCUGAUCGUUGAAAAUAACUAUCUAUAAAGAUGGAGAAGAUACGCAAGAAAGAGUUGUAAACACAAAGC

miRBase

Precursor miRNA Structure(5'-3')

UGCUCGAUUCUUCAGAUAGAAAUUCUGGUCAUCUUUGUGUUUAGGCUUUUUCUUGCAUAUGUUCUUUAUCUCUAUUGAUUGAUAUUGUUCAAUGAGCAACAUACUUUUCUCUUCUACCUGGAUUUGUUUGAUGGUUUUAAGAACUCUGUUCUUUUU        -A         AUA         G    C  C    GC           CAC    ---CUU   AU 
                                                                                                                                                            GACGUUUU  CCCAACAAU   ACUUCUGUU UAGU AU UUCU  UGCAACCCAUC   AAAG      AUC  G
                                                                                                                                                            ||||||||  |||||||||   ||||||||| |||| || ||||  |||||||||||   ||||      |||   
                                                                                                                                                            CUGCAAAA  GGGUUGUUA   UGAAGAUAA AUCA UA AAGA  ACGUUGGGUAG   UUUC      UAG  A
------------------------------------------------------------CGAAACACAAAUGUUGAGAAAGAACGCAUAGAAGAGGUAGAAAUAUCUAUCAAUAAAAGUUGCUAGUCGUAGGAUAAGAGAUUAUGGACCUAAACA        AG         CAA         A    C  C    GA           CUC    CCAAAU   AA

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.