TarDB

Precursor miRNA Sequence(5'-3')

UUAUUUUUAAUUUGGACGUUUAAUACCUCUAGUAUUUAAUUUGGAAGAAAAAUACCUUAAUUAAUUUUGGUUACCUAUCAAAAAGUUGGUAUAAUCGUACCUCCGAGUUAACUUCCGUCAACUACCCUAACGGAAACAUAUUCGUAUAAUCAAGAAAAGCGAUUGUACUUAUUUACAUAAUUAACAUGAGUUAAGUUUUAACCACAGUUAACAAUUCCGUUAGGGUAGUUAACGGAAGUUAACUCGAAGGUAAGAUUAUACCAACUUUUUAAAAAACGAAAGUUUUAAUAAGUAACCAAAAUUAACUAAGGUGUUUUUCUUCCAAAUUAAAUAGUAGAGGUAUUAAACG

miRBase

Precursor miRNA Structure(5'-3')

UUAUUUUUAAUUUGGA               G                           A              C   CAAAAAGUUGGUAUAAUCGUACCUCCGAGUUAACUUCCGUCAACUACCCUAACGGAAACAUAUUCGUAUAAUCAAGAAAAGCGAUUGUACUUAUUUACAUAAU 
                CGUUUAAUACCUCUA UAUUUAAUUUGGAAGAAAAAUACCUUA UUAAUUUUGGUUAC UAU                                                                                                       U
                ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||                                                                                                       A
                GCAAAUUAUGGAGAU AUAAAUUAAACCUUCUUUUUGUGGAAU AAUUAAAACCAAUG AUA                                                                                                       A
----------------               G                           C              A   AUUUUGAAAGCAAAAAAUUUUUCAACCAUAUUAGAAUGGAAGCUCAAUUGAAGGCAAUUGAUGGGAUUGCCUUAACAAUUGACACCAAUUUUGAAUUGAGUAC

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.