TarDB

Precursor miRNA Sequence(5'-3')

UAGAGUGAUUACACAUACAAGUGGUCUUGCUUCUUCUAUGGUUUUAAAACUGCAAAUAAAGAUUUGCUUCGCAGGAGAGAUAGCGCCAUCACCUCUUCUAAGAAGUUAACUAGUGGUGACGGUAUCUCUCCUACGUAGCAAUCCUUAUAUAUGCAUCUUAAUACGGAGAGAUCAAGGUAUUUCAGUUGUUCAAUAAUCACCCUCUA

miRBase

Precursor miRNA Structure(5'-3')

    --       CACAU    G   ----     CU   U  A G  U    AAC    A   -   AU     U  C          G  C      -----CU      
UAGA  GUGAUUA     ACAA UGG    UCUUG  UCU CU U GU UUAA   UGCA AUA AAG  UUGCU CG AGGAGAGAUA CG CAUCAC       CUUCU 
||||  |||||||     |||| |||    |||||  ||| || | || ||||   |||| ||| |||  ||||| || |||||||||| || ||||||       |||| A
AUCU  CACUAAU     UGUU ACU    GGAAC  AGA GA G CA AAUU   ACGU UAU UUC  AACGA GC UCCUCUCUAU GC GUGGUG       GAAGA 
    CC       -AACU    G   UUAU     -U   -  - G  U    -CU    A   A   CU     U  A          G  A      AUCAAUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.