TarDB

Precursor miRNA Sequence(5'-3')

ACAAUUAUGGAAUGACAAGCAUGUACUGAAACUGAGAGUAUAUGGGCACUGUGUCCAACUGAAAGAGAAAAGACACAAAGUUUCCUUAUAAAUACAGUACAAAUCACAAGUUCAGCCAUCUUAUAUGUACAGUAAUCUUCCAAUAGGUCUAGCAUGUGCUGAAACUGUGUGUUGUGUGUACAAUGUUCUCAUAUACACACAGUUUCAGCACAUGCUGGAUCUACUUGAAGACUACUGUUCUUAUAAGGUACUGAACUUGUUAUCUGUACUGUGUAUAUAUGAGAUCUCUGUAUUCUUGCUCUUUUAGUUUGACACUUUGUUCUCAUAUACACUCGGUUUCAGCACAUGCUUGACUUACUUGCUUGU

miRBase

Precursor miRNA Structure(5'-3')

ACAAUUAUGGAAUGA         A           A         C  --U     C           AA    -C   A  -    CU    A          A  C          CC        U U      A     CAA                             U     UACA 
               CAAGCAUGU CUGAAACUGAG GUAUAUGGG AC   GUGUC AACUGAAAGAG  AAGA  ACA AG UUUC  UAUA AUACAGUACA AU ACAAGUUCAG  AUCUUAUA G ACAGUA UCUUC   UAGGUCUAGCAUGUGCUGAAACUGUGUGU GUGUG    A
               ||||||||| ||||||||||| ||||||||| ||   ||||| |||||||||||  ||||  ||| || ||||  |||| |||||||||| || ||||||||||  |||||||| | |||||| |||||   ||||||||||||||||||||||||||||| |||||    U
               GUUCGUACA GACUUUGGCUC CAUAUACUC UG   CACAG UUGAUUUUCUC  UUCU  UGU UC AGAG  AUAU UGUGUCAUGU UA UGUUCAAGUC  UGGAAUAU C UGUCAU AGAAG   AUCUAGGUCGUACACGACUUUGACACACA UAUAC    U
-UGUUCGUUCAUUCA         C           A         U  UUU     U           -G    UA   C  U    -U    A          C  U          -A        U U      C     UUC                             -     UCUU

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.