TarDB

Precursor miRNA Sequence(5'-3')

CUCCUAUCGUCCAAUAGUUUUUUUGGAAAGGCUUCAUUUAAACAGAGAGUCGUUUUAUCCUGGGAACUCACUCCAUCGUGAAUACUCGGAAGCUAGACGUGUGGCAGGGAAAAUGAGUUAAGGGAAACCGUGAUUAGUAUGACAUCGCCAACCGGCAGCAUUCACAAAGAUCUUAAACUCCUUUCCCCUGCCACUCUUUUAGCUUCCGAAUCUUUUUCGAUGGGUGAGUUCCUUGGAGAAAAAAUCUUUCUCUACGGAUGAAGCGUUUACGAAGAAACAAUUGGGAUGGAG

miRBase

Precursor miRNA Structure(5'-3')

    U   GU     A         GA  G         AAAC      UCG    A   U          U      U   -UAC            C U         A   U     -    GAAACC    UUAGU   A AUC   A 
CUCC AUC  CCAAU GUUUUUUUG  AA GCUUCAUUU    AGAGAG   UUUU UCC GGGAACUCAC CCAUCG GAA    UCGGAAGCUAGA G GUGGCAGGG AAA GAGUU AAGG      GUGA     AUG C   GCC A
|||| |||  ||||| |||||||||  || |||||||||    ||||||   |||| ||| |||||||||| |||||| |||    |||||||||||| | ||||||||| ||| ||||| ||||      ||||     ||| |   |||  
GAGG UAG  GGUUA CAAAGAAGC  UU CGAAGUAGG    UCUUUC   AAAA AGG UCCUUGAGUG GGUAGC UUU    AGCCUUCGAUUU C CACCGUCCC UUU CUCAA UUCU      CACU     UAC G   CGG G
    -   --     A         AU  G         CAUC      UAA    G   U          -      U   UCUA            U U         C   C     A    -AGAAA    -----   - --A   C

TarDB: A miRNA Target Database in Plants.

TarDB employs cross-species conservation filter, degradome and sRNA-seq data to identify high-confidence miRNA targets in plants.

miRNA ID

Organism

Mature miRNA Sequence(5'-3')

Precursor miRNA Sequence(5'-3')

Precursor miRNA Structure(5'-3')

Homologous Mature miRNAs miRNAs are clustered by CD-HIT with sequence identity of >85% and word size of 5.