Vitis vinifera tRNA modification sites

tRNA_ID Type Position Ref_nt Pred_mod H1_Pval H4_Pval Data_Acc
Vvinifera_tR101 Gly-TCC 57 A m1A|m1I|ms2i6A 6.81E-12 0.008854822 VVI2
Vvinifera_tR101 Gly-TCC 57 A m1A|m1I|ms2i6A 2.06E-34 1.81E-07 VVI3
Vvinifera_tR118 Glu-CTC 58 A m1A|m1I|ms2i6A 3.58E-122 0.000987115 VVI1
Vvinifera_tR118 Glu-CTC 58 A m1A|m1I|ms2i6A 2.95E-51 0.000226006 VVI2
Vvinifera_tR118 Glu-CTC 58 A m1A|m1I|ms2i6A 0 1.46E-20 VVI3
Vvinifera_tR119 Leu-TAG 65 A i6A|t6A 5.68E-15 0.005616329 VVI3
Vvinifera_tR123 Val-AAC 59 A m1A|m1I|ms2i6A 3.17E-130 3.33E-13 VVI2
Vvinifera_tR123 Val-AAC 59 A m1A|m1I|ms2i6A 0 4.66E-17 VVI3
Vvinifera_tR137 Gln-CTG 57 A m1A|m1I|ms2i6A 3.61E-25 4.10E-07 VVI3
Vvinifera_tR144 Arg-TCG 59 A m1A|m1I|ms2i6A 9.91E-98 2.84E-10 VVI3
Vvinifera_tR145 Leu-CAG 66 A m1A|m1I|ms2i6A 1.85E-08 0.012036015 VVI3
Vvinifera_tR147 Gln-CTG 57 A m1A|m1I|ms2i6A 1.24E-59 0.018314252 VVI3
Vvinifera_tR15 Ala-AGC 26 G m1G 1.41E-59 0.000488244 VVI3
Vvinifera_tR15 Ala-AGC 58 A m1A|m1I|ms2i6A 2.83E-46 0.003899004 VVI3
Vvinifera_tR17 Val-TAC 9 G m1G 2.97E-07 0.022100198 VVI3
Vvinifera_tR21 Ala-AGC 26 G m1G 7.39E-67 0.00049767 VVI3
Vvinifera_tR22 Ile-AAT 59 A m1A|m1I|ms2i6A 2.39E-38 1.12E-06 VVI2
Vvinifera_tR22 Ile-AAT 59 A m1A|m1I|ms2i6A 4.82E-118 5.64E-14 VVI3
Vvinifera_tR24 Gln-TTG 57 A m1A|m1I|ms2i6A 2.68E-126 6.21E-17 VVI3
Vvinifera_tR28 Ser-CGA 67 A m1A|m1I|ms2i6A 1.42E-33 7.82E-06 VVI3
Vvinifera_tR30 Ala-TGC 26 G m1G 8.88E-48 2.43E-08 VVI3
Vvinifera_tR31 Ile-AAT 59 A m1A|m1I|ms2i6A 8.85E-17 0.020464625 VVI2
Vvinifera_tR31 Ile-AAT 59 A m1A|m1I|ms2i6A 1.06E-109 1.63E-19 VVI3
Vvinifera_tR33 Val-TAC 9 G m1G 3.42E-14 0.019366407 VVI2
Vvinifera_tR33 Val-TAC 9 G m2G|m22G 1.91E-25 0.000177536 VVI3
Vvinifera_tR36 Ser-GCT 67 A m1A|m1I|ms2i6A 2.75E-208 2.67E-20 VVI2
Vvinifera_tR36 Ser-GCT 67 A m1A|m1I|ms2i6A 7.6086109459552e-322 4.83E-69 VVI3
Vvinifera_tR38 Arg-TCT 58 A m1A|m1I|ms2i6A 1.57E-45 1.20E-05 VVI3
Vvinifera_tR4 Arg-CCG 58 A m1A|m1I|ms2i6A 1.79E-12 0.029957702 VVI3
Vvinifera_tR41 Glu-CTC 58 A m1A|m1I|ms2i6A 3.85E-50 0.001207411 VVI2
Vvinifera_tR41 Glu-CTC 58 A m1A|m1I|ms2i6A 0 3.47E-21 VVI3
Vvinifera_tR48 Arg-TCG 59 A m1A|m1I|ms2i6A 7.57E-77 0.000600569 VVI3
Vvinifera_tR49 Tyr-GTA 26 G m1G 6.19E-25 0.000997154 VVI2
Vvinifera_tR5 Leu-AAG 66 A i6A|t6A 5.78E-09 0.043470115 VVI3
Vvinifera_tR53 Arg-TCT 58 A m1A|m1I|ms2i6A 3.51E-58 8.59E-05 VVI3
Vvinifera_tR57 Val-AAC 9 G m2G|m22G 1.05E-287 0.0370465 VVI3
Vvinifera_tR57 Val-AAC 59 A m1A|m1I|ms2i6A 1.08E-136 8.68E-12 VVI2
Vvinifera_tR57 Val-AAC 59 A m1A|m1I|ms2i6A 0 7.31E-13 VVI3
Vvinifera_tR58 Tyr-GTA 70 A m1A|m1I|ms2i6A 1.44E-11 0.015600349 VVI3
Vvinifera_tR60 Arg-CCT 58 A i6A|t6A 1.19E-26 0.00985224 VVI3
Vvinifera_tR63 Asp-GTC 57 A m1A|m1I|ms2i6A 6.49E-68 3.98E-15 VVI3
Vvinifera_tR64 Gly-TCC 57 A m1A|m1I|ms2i6A 2.17E-35 6.67E-10 VVI2
Vvinifera_tR64 Gly-TCC 57 A m1A|m1I|ms2i6A 5.12E-134 1.42E-22 VVI3
Vvinifera_tR7 Leu-CAA 69 A m1A|m1I|ms2i6A 1.27E-09 0.002245296 VVI3
Vvinifera_tR70 Asp-GTC 57 A m1A|m1I|ms2i6A 6.93E-60 0.002180878 VVI3
Vvinifera_tR71 Tyr-GTA 26 G m1G 7.21E-44 0.002791349 VVI3
Vvinifera_tR74 Gly-TCC 57 A m1A|m1I|ms2i6A 2.76E-49 5.27E-11 VVI2
Vvinifera_tR74 Gly-TCC 57 A m1A|m1I|ms2i6A 2.59E-124 3.70E-26 VVI3
Vvinifera_tR8 Gln-CTG 57 A m1A|m1I|ms2i6A 8.62E-28 7.00E-09 VVI3
Vvinifera_tR84 Arg-CCG 58 A m1A|m1I|ms2i6A 2.31E-13 0.000603605 VVI2
Vvinifera_tR86 Ile-AAT 59 A m1A|m1I|ms2i6A 1.70E-28 0.00985224 VVI3
Vvinifera_tR89 Cys-GCA 36 G m1G 3.06E-07 0.040211491 VVI3
Vvinifera_tR90 Cys-GCA 36 G m1G 9.77E-12 0.000276313 VVI3
Vvinifera_tR91 Leu-CAA 69 A i6A|t6A 7.83E-15 0.002245296 VVI3
Vvinifera_tR93 Arg-TCT 58 A m1A|m1I|ms2i6A 1.05E-54 0.001281014 VVI3