Malus domestica tRNA modification sites

tRNA_ID Type Position Ref_nt Pred_mod H1_Pval H4_Pval Data_Acc
Mdomestica_tR102 Glu-CTC 58 A m1A|m1I|ms2i6A 3.02E-43 0.047075004 APL_Lf
Mdomestica_tR103 Gln-CTG 57 A m1A|m1I|ms2i6A 1.61E-132 6.38E-17 APL_Lf
Mdomestica_tR104 Ala-TGC 26 G m1G 2.30E-11 0.016331344 APL_Lf
Mdomestica_tR104 Ala-TGC 58 A m1A|m1I|ms2i6A 2.08E-133 1.72E-10 APL_Lf
Mdomestica_tR105 Tyr-GTA 26 G m2G|m22G 0 0.0238929 APL_Lf
Mdomestica_tR105 Tyr-GTA 73 A m1A|m1I|ms2i6A 6.70E-15 0.025584814 APL_Lf
Mdomestica_tR108 Arg-ACG 58 A m1A|m1I|ms2i6A 4.07E-68 8.16E-08 APL_Lf
Mdomestica_tR109 Gln-CTG 57 A m1A|m1I|ms2i6A 9.03E-119 3.01E-24 APL_Lf
Mdomestica_tR110 Val-AAC 59 A m1A|m1I|ms2i6A 2.23E-77 0.000224978 APL_Lf
Mdomestica_tR111 Gly-GCC 9 G m1G 4.05E-158 4.75E-13 APL_Fl
Mdomestica_tR113 Gly-TCC 57 A m1A|m1I|ms2i6A 0 1.40E-119 APL_Lf
Mdomestica_tR12 Gln-CTG 57 A m1A|m1I|ms2i6A 2.15E-181 6.93E-15 APL_Lf
Mdomestica_tR122 Val-TAC 58 A m1A|m1I|ms2i6A 1.20E-266 3.13E-37 APL_Lf
Mdomestica_tR127 Ser-AGA 26 G m1G 4.24E-24 1.11E-05 APL_Lf
Mdomestica_tR127 Ser-AGA 67 A m1A|m1I|ms2i6A 7.98E-19 0.005395921 APL_Lf
Mdomestica_tR129 Asp-GTC 57 A m1A|m1I|ms2i6A 0 8.65E-31 APL_Lf
Mdomestica_tR130 Arg-CCG 58 A m1A|m1I|ms2i6A 4.56E-208 0.01424647 APL_Lf
Mdomestica_tR131 Arg-CCG 58 A m1A|m1I|ms2i6A 5.46E-165 2.45E-06 APL_Lf
Mdomestica_tR132 Arg-CCG 58 A m1A|m1I|ms2i6A 1.73E-290 0.001189785 APL_Lf
Mdomestica_tR134 His-GTG 57 A m1A|m1I|ms2i6A 5.72E-75 6.59E-07 APL_Lf
Mdomestica_tR135 Lys-CTT 58 A m1A|m1I|ms2i6A 5.81E-32 2.37E-09 APL_Lf
Mdomestica_tR14 Val-CAC 59 A m1A|m1I|ms2i6A 1.01E-73 0.017910333 APL_Lf
Mdomestica_tR141 Leu-CAA 69 A i6A|t6A 3.99E-83 4.55E-14 APL_Lf
Mdomestica_tR146 Leu-CAA 69 A m1A|m1I|ms2i6A 6.24E-97 1.20E-17 APL_Lf
Mdomestica_tR15 Gly-TCC 57 A m1A|m1I|ms2i6A 1.43E-30 0.036455727 APL_Lf
Mdomestica_tR156 Tyr-GTA 26 G m2G|m22G 0 4.41E-10 APL_Lf
Mdomestica_tR159 Tyr-GTA 26 G m2G|m22G 0 5.08E-11 APL_Lf
Mdomestica_tR159 Tyr-GTA 75 A m1A|m1I|ms2i6A 3.63E-21 2.80E-06 APL_Lf
Mdomestica_tR16 Gly-GCC 9 G m1G 1.12E-164 1.23E-17 APL_Fl
Mdomestica_tR160 Cys-GCA 36 G m1G 3.49E-28 4.62E-08 APL_Lf
Mdomestica_tR167 Val-CAC 59 A m1A|m1I|ms2i6A 9.56E-84 1.94E-05 APL_Lf
Mdomestica_tR170 Tyr-GTA 26 G m2G|m22G 3.55194464613222e-317 0.000685236 APL_Lf
Mdomestica_tR174 Val-TAC 58 A m1A|m1I|ms2i6A 2.66E-138 1.78E-09 APL_Lf
Mdomestica_tR176 Tyr-GTA 26 G m2G|m22G 0 2.80E-06 APL_Lf
Mdomestica_tR177 Tyr-GTA 26 G m2G|m22G 0 3.23E-10 APL_Lf
Mdomestica_tR178 Ala-TGC 58 A m1A|m1I|ms2i6A 8.57E-46 0.017570972 APL_Lf
Mdomestica_tR179 Asp-GTC 57 A m1A|m1I|ms2i6A 0 5.08E-37 APL_Lf
Mdomestica_tR18 Gly-GCC 9 G m1G 2.49E-180 7.06E-17 APL_Fl
Mdomestica_tR180 Arg-ACG 58 A m1A|m1I|ms2i6A 3.66E-120 0.002126412 APL_Lf
Mdomestica_tR181 Ile-AAT 59 A m1A|m1I|ms2i6A 0 1.69E-10 APL_Lf
Mdomestica_tR183 Leu-CAA 69 A m1A|m1I|ms2i6A 1.27E-106 2.01E-16 APL_Lf
Mdomestica_tR184 Arg-CCT 20 T D 1.06E-10 0.02594759 APL_Lf
Mdomestica_tR187 Leu-TAG 65 A m1A|m1I|ms2i6A 4.85E-108 1.54E-14 APL_Lf
Mdomestica_tR188 Leu-TAG 65 A m1A|m1I|ms2i6A 2.22E-44 1.92E-05 APL_Lf
Mdomestica_tR191 Tyr-GTA 26 G m2G|m22G 3.03E-298 0.003223347 APL_Lf
Mdomestica_tR193 Asp-GTC 57 A m1A|m1I|ms2i6A 0 6.74E-29 APL_Lf
Mdomestica_tR194 Thr-TGT 57 A m1A|m1I|ms2i6A 0 1.63E-11 APL_Lf
Mdomestica_tR196 Leu-AAG 66 A m1A|m1I|ms2i6A 6.26E-36 0.000265895 APL_Lf
Mdomestica_tR197 Asn-GTT 59 A m1A|m1I|ms2i6A 2.04E-68 0.030464079 APL_Lf
Mdomestica_tR199 Thr-AGT 59 A m1A|m1I|ms2i6A 8.17E-69 2.79E-05 APL_Lf
Mdomestica_tR200 Ser-GCT 67 A m1A|m1I|ms2i6A 0 6.80E-124 APL_Lf
Mdomestica_tR201 Arg-CCT 58 A i6A|t6A 1.75E-211 8.76E-34 APL_Lf
Mdomestica_tR202 Ala-AGC 26 G m1G 5.45E-63 0.000384987 APL_Lf
Mdomestica_tR203 Gly-GCC 9 G m1G 2.76E-98 0.000627528 APL_Fl
Mdomestica_tR203 Gly-GCC 9 G m1G 1.41E-19 0.008119017 APL_Lf
Mdomestica_tR204 Cys-GCA 36 G m1G 5.78E-29 0.000157365 APL_Lf
Mdomestica_tR21 Thr-CGT 57 A m1A|m1I|ms2i6A 6.23E-133 0.00660393 APL_Lf
Mdomestica_tR210 Asn-GTT 59 A m1A|m1I|ms2i6A 4.24E-24 1.30E-07 APL_Lf
Mdomestica_tR210 Asn-GTT 60 T D 1.84E-18 0.015786857 APL_Lf
Mdomestica_tR213 Ala-TGC 26 G m1G 1.79E-11 0.000464675 APL_Lf
Mdomestica_tR213 Ala-TGC 58 A m1A|m1I|ms2i6A 4.93E-85 3.58E-06 APL_Lf
Mdomestica_tR217 Arg-ACG 58 A m1A|m1I|ms2i6A 4.37E-93 1.91E-06 APL_Lf
Mdomestica_tR219 Leu-CAG 66 A m1A|m1I|ms2i6A 2.63E-133 3.50E-07 APL_Lf
Mdomestica_tR220 Arg-TCG 59 A m1A|m1I|ms2i6A 4.57E-267 7.26E-10 APL_Lf
Mdomestica_tR221 Met-CAT 57 A m1A|m1I|ms2i6A 1.18E-274 7.40E-20 APL_Lf
Mdomestica_tR222 Undet-??? 58 A m1A|m1I|ms2i6A 7.56E-272 3.20E-14 APL_Lf
Mdomestica_tR23 Tyr-GTA 26 G m2G|m22G 0 0.017561951 APL_Lf
Mdomestica_tR24 Ala-AGC 26 G m1G 6.08E-58 2.04E-12 APL_Lf
Mdomestica_tR27 Val-TAC 58 A m1A|m1I|ms2i6A 3.43E-243 1.12E-27 APL_Lf
Mdomestica_tR29 Leu-CAA 69 A m1A|m1I|ms2i6A 6.27E-90 4.36E-13 APL_Lf
Mdomestica_tR30 Ser-TGA 67 A m1A|m1I|ms2i6A 4.86E-89 0.004412662 APL_Lf
Mdomestica_tR32 Gly-GCC 9 G m1G 2.06E-161 3.47E-15 APL_Fl
Mdomestica_tR35 Ala-CGC 26 G m1G 6.87E-43 1.67E-10 APL_Lf
Mdomestica_tR36 Ile-AAT 59 A m1A|m1I|ms2i6A 0 5.49E-12 APL_Lf
Mdomestica_tR39 Gln-TTG 57 A m1A|m1I|ms2i6A 0 1.70E-30 APL_Lf
Mdomestica_tR43 Ala-AGC 26 G m2G|m22G 8.31E-64 0.010991915 APL_Lf
Mdomestica_tR44 Thr-TGT 57 A m1A|m1I|ms2i6A 5.64E-160 3.71E-18 APL_Lf
Mdomestica_tR45 Gln-CTG 57 A m1A|m1I|ms2i6A 7.78E-185 4.53E-21 APL_Lf
Mdomestica_tR50 Leu-CAA 69 A m1A|m1I|ms2i6A 1.13E-97 1.97E-13 APL_Lf
Mdomestica_tR53 Ser-CGA 67 A m1A|m1I|ms2i6A 0 7.75E-147 APL_Lf
Mdomestica_tR54 Val-AAC 59 A i6A|t6A 2.01E-10 0.011105018 APL_Lf
Mdomestica_tR56 Tyr-GTA 26 G m2G|m22G 2.19E-231 1.20E-05 APL_Lf
Mdomestica_tR61 Ala-AGC 26 G m1G 2.33E-70 3.11E-10 APL_Lf
Mdomestica_tR61 Ala-AGC 37 A i6A|t6A 9.50E-17 0.004017683 APL_Lf
Mdomestica_tR61 Ala-AGC 58 A m1A|m1I|ms2i6A 3.05E-107 2.02E-11 APL_Lf
Mdomestica_tR62 Tyr-GTA 26 G m2G|m22G 5.66E-267 1.43E-07 APL_Lf
Mdomestica_tR67 Ala-AGC 26 G m1G 7.85E-71 1.11E-05 APL_Lf
Mdomestica_tR68 Ile-AAT 59 A m1A|m1I|ms2i6A 0 1.02E-14 APL_Lf
Mdomestica_tR73 His-GTG 57 A m1A|m1I|ms2i6A 1.46E-73 2.00E-10 APL_Lf
Mdomestica_tR76 Phe-GAA 26 G m1G 5.82E-11 0.003000196 APL_Lf
Mdomestica_tR77 Val-TAC 58 A m1A|m1I|ms2i6A 7.63E-110 1.71E-14 APL_Lf
Mdomestica_tR80 Ser-TGA 67 A m1A|m1I|ms2i6A 3.40E-78 0.000685236 APL_Lf
Mdomestica_tR81 Arg-TCG 38 G m1G 9.22E-39 0.028732794 APL_Lf
Mdomestica_tR81 Arg-TCG 59 A m1A|m1I|ms2i6A 3.28E-272 1.93E-10 APL_Lf
Mdomestica_tR83 Ser-TGA 67 A m1A|m1I|ms2i6A 1.41E-66 0.00022887 APL_Lf
Mdomestica_tR91 Arg-TCT 58 A m1A|m1I|ms2i6A 2.87E-109 2.58E-06 APL_Lf
Mdomestica_tR94 Leu-AAG 66 A m1A|m1I|ms2i6A 1.25E-46 1.15E-10 APL_Lf
Mdomestica_tR95 Leu-AAG 66 A m1A|m1I|ms2i6A 3.12E-51 2.52E-08 APL_Lf
Mdomestica_tR97 Phe-GAA 58 A m1A|m1I|ms2i6A 0 6.24E-35 APL_Lf
Mdomestica_tR99 Tyr-GTA 26 G m2G|m22G 5.33E-306 0.000685236 APL_Lf